Gene name: RPO26
Reference locus (S288C): YPR187W
Gene biotype: protein_coding
Description: RNA polymerase subunit ABC23; common to RNA polymerases I, II, and III; part of central core; similar to bacterial omega subunit; Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family
Top 10 interactors (score): RPC25 (0.999); RPB8 (0.999); RPC10 (0.999); RPA49 (0.999); RPC53 (0.999); RPA135 (0.999); RPB11 (0.999); RPA12 (0.999); RPB4 (0.999); RPB2 (0.999); RPB7 (0.999); RPO31 (0.999); RPC82 (0.999); RPC34 (0.999); RPC40 (0.999); RPB5 (0.999); RPC19 (0.999); RPB10 (0.999); RPO21 (0.999); RPB9 (0.999)
Homologues (species, bitscore): POLR2F (Homo sapiens, 133.3); Polr2f (Mus musculus, 133.3); polr2f (Danio rerio, 136.0); polr2f (Xenopus tropicalis, 134.4); RpII18 (Drosophila melanogaster, 132.9); rpb-6 (Caenorhabditis elegans, 131.0); NRPB6A (Arabidopsis thaliana, 130.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:865542-866085:+ | gene-YPR187W_AKU4011 | rna-NM_001184284.1_AKU4011 | cds-NP_015513.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:31637-32180:- | gene-YPR187W_BG1 | rna-NM_001184284.1_BG1 | cds-NP_015513.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:946817-947360:+ | gene-YPR187W_Bruggeman | rna-NM_001184284.1_Bruggeman | cds-NP_015513.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:988872-989415:+ | gene-YPR187W_CAT1 | rna-NM_001184284.1_CAT1 | cds-NP_015513.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:870343-870886:+ | gene-YPR187W_CBS1585 | rna-NM_001184284.1_CBS1585 | cds-NP_015513.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:883880-884423:+ | gene-YPR187W_CBS436 | rna-NM_001184284.1_CBS436 | cds-NP_015513.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:872126-872669:+ | gene-YPR187W_CBS6412 | rna-NM_001184284.1_CBS6412 | cds-NP_015513.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:867271-867814:+ | gene-YPR187W_CBS6413 | rna-NM_001184284.1_CBS6413 | cds-NP_015513.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:911333-911876:+ | gene-YPR187W_CENPK1137D | rna-NM_001184284.1_CENPK1137D | cds-NP_015513.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:1187295-1187838:+ | gene-YPR187W_EthanolRed | rna-NM_001184284.1_EthanolRed | cds-NP_015513.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:867368-867911:+ | gene-YPR187W_FaliES1 | rna-NM_001184284.1_FaliES1 | cds-NP_015513.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000081.1:54659-55202:+ | gene-YPR187W_JAY291 | rna-NM_001184284.1_JAY291 | cds-NP_015513.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:914047-914590:+ | gene-YPR187W_MUCL30387 | rna-NM_001184284.1_MUCL30387 | cds-NP_015513.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:888179-888722:+ | gene-YPR187W_MUCL30388 | rna-NM_001184284.1_MUCL30388 | cds-NP_015513.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:862544-863087:+ | gene-YPR187W_MUCL39482 | rna-NM_001184284.1_MUCL39482 | cds-NP_015513.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:927005-927548:+ | gene-YPR187W_MUCL42920 | rna-NM_001184284.1_MUCL42920 | cds-NP_015513.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:911240-911783:+ | gene-YPR187W_NCIM3186 | rna-NM_001184284.1_NCIM3186 | cds-NP_015513.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:870905-871448:+ | gene-YPR187W_NCYC1407 | rna-NM_001184284.1_NCYC1407 | cds-NP_015513.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:883187-883730:+ | gene-YPR187W_PE2H3 | rna-NM_001184284.1_PE2H3 | cds-NP_015513.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:882835-883378:+ | gene-YPR187W_PE2H4 | rna-NM_001184284.1_PE2H4 | cds-NP_015513.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:911257-911800:+ | gene-YPR187W_S288C | rna-NM_001184284.1_S288C | cds-NP_015513.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000060.1:14011-14554:- | gene-YPR187W_SA1 | rna-NM_001184284.1_SA1 | cds-NP_015513.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:867056-867599:+ | gene-YPR187W_ThermosaccDry | rna-NM_001184284.1_ThermosaccDry | cds-NP_015513.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:894840-895383:+ | gene-YPR187W_VR1 | rna-NM_001184284.1_VR1 | cds-NP_015513.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:869601-870144:+ | gene-YPR187W_ZTW1 | rna-NM_001184284.1_ZTW1 | cds-NP_015513.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:871633-872176:+ | gene-YPR187W_Sparadoxus | rna-NM_001184284.1_Sparadoxus | cds-NP_015513.1_Sparadoxus | 96.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |