Gene name: RPM2
Reference locus (S288C): YML091C
Gene biotype: protein_coding
Description: Protein subunit of mitochondrial RNase P; has roles in nuclear transcription, cytoplasmic and mitochondrial RNA processing, and mitochondrial translation; distributed to mitochondria, cytoplasmic processing bodies, and the nucleus
Top 10 interactors (score): RPR2 (0.984); POP4 (0.98); POP1 (0.979); POP6 (0.979); POP8 (0.979); RPP1 (0.979); POP5 (0.979); POP7 (0.979); SEN54 (0.9); POP3 (0.9); SEN2 (0.9); MMS4 (0.9); SEN34 (0.9); MUS81 (0.9); SEN15 (0.9); PET130 (0.867); TRM82 (0.861); DSS1 (0.82); YML090W (0.815); RMP1 (0.812)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:80844-84452:- | gene-YML091C_AKU4011 | rna-NM_001182450.1_AKU4011 | cds-NP_013619.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:391728-395336:+ | gene-YML091C_BG1 | rna-NM_001182450.1_BG1 | cds-NP_013619.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:87023-90631:- | gene-YML091C_Bruggeman | rna-NM_001182450.1_Bruggeman | cds-NP_013619.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:88656-92264:- | gene-YML091C_CAT1 | rna-NM_001182450.1_CAT1 | cds-NP_013619.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:80845-84453:- | gene-YML091C_CBS1585 | rna-NM_001182450.1_CBS1585 | cds-NP_013619.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:86781-90389:- | gene-YML091C_CBS436 | rna-NM_001182450.1_CBS436 | cds-NP_013619.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:81562-85170:- | gene-YML091C_CBS6412 | rna-NM_001182450.1_CBS6412 | cds-NP_013619.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:80032-83640:- | gene-YML091C_CBS6413 | rna-NM_001182450.1_CBS6413 | cds-NP_013619.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:81842-85450:- | gene-YML091C_CENPK1137D | rna-NM_001182450.1_CENPK1137D | cds-NP_013619.1_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:81151-84729:- | gene-YML091C_EthanolRed | rna-NM_001182450.1_EthanolRed | cds-NP_013619.1_EthanolRed | 98.0 | 99.1 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:81631-85239:- | gene-YML091C_FaliES1 | rna-NM_001182450.1_FaliES1 | cds-NP_013619.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000345.1:5022-8630:+ | gene-YML091C_JAY291 | rna-NM_001182450.1_JAY291 | cds-NP_013619.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:85543-89151:- | gene-YML091C_MUCL30387 | rna-NM_001182450.1_MUCL30387 | cds-NP_013619.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:88693-92301:- | gene-YML091C_MUCL30388 | rna-NM_001182450.1_MUCL30388 | cds-NP_013619.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:80859-84467:- | gene-YML091C_MUCL39482 | rna-NM_001182450.1_MUCL39482 | cds-NP_013619.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:85601-89209:- | gene-YML091C_MUCL42920 | rna-NM_001182450.1_MUCL42920 | cds-NP_013619.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:87077-90685:- | gene-YML091C_NCIM3186 | rna-NM_001182450.1_NCIM3186 | cds-NP_013619.1_NCIM3186 | 96.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:81657-85265:- | gene-YML091C_NCYC1407 | rna-NM_001182450.1_NCYC1407 | cds-NP_013619.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:87012-90620:- | gene-YML091C_PE2H3 | rna-NM_001182450.1_PE2H3 | cds-NP_013619.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:86950-90558:- | gene-YML091C_PE2H4 | rna-NM_001182450.1_PE2H4 | cds-NP_013619.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:87123-90731:- | gene-YML091C_S288C | rna-NM_001182450.1_S288C | cds-NP_013619.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000041.1:93539-97147:+ | gene-YML091C_SA1 | rna-NM_001182450.1_SA1 | cds-NP_013619.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:80922-84530:- | gene-YML091C_ThermosaccDry | rna-NM_001182450.1_ThermosaccDry | cds-NP_013619.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:85305-88913:- | gene-YML091C_VR1 | rna-NM_001182450.1_VR1 | cds-NP_013619.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:60450-64058:- | gene-YML091C_ZTW1 | rna-NM_001182450.1_ZTW1 | cds-NP_013619.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:91627-95250:- | gene-YML091C_Sparadoxus | rna-NM_001182450.1_Sparadoxus | cds-NP_013619.1_Sparadoxus | 89.8 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |