Gene name: RPL9B
Reference locus (S288C): YNL067W
Gene biotype: protein_coding
Description: Ribosomal 60S subunit protein L9B; homologous to mammalian ribosomal protein L9 and bacterial L6; RPL9B has a paralog, RPL9A, that arose from a single-locus duplication
Top 10 interactors (score): RPS4A (0.999); RPL40B (0.999); RPL35A (0.999); RPL8B (0.999); RPL37B (0.999); RPL12A (0.999); RPS23A (0.999); RPL34B (0.999); RPS11A (0.999); RPS10A (0.999); RPL19A (0.999); RPS12 (0.999); RPS8A (0.999); RPL13B (0.999); RPS16B (0.999); RPL33B (0.999); RPL4B (0.999); RPL30 (0.999); RPS4B (0.999); TMA19 (0.999)
Homologues (species, bitscore): RPL9 (Homo sapiens, 182.2); Rpl9 (Mus musculus, 182.6); rpl9 (Danio rerio, 186.4); rpl9 (Xenopus tropicalis, 184.1); RpL9 (Drosophila melanogaster, 176.4); rpl-9 (Caenorhabditis elegans, 192.2); RPL9B (Arabidopsis thaliana, 188.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:493354-493929:+ | gene-YNL067W_AKU4011 | rna-NM_001182905.1_AKU4011 | cds-NP_014332.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:397371-397946:+ | gene-YNL067W_BG1 | rna-NM_001182905.1_BG1 | cds-NP_014332.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:504081-504656:+ | gene-YNL067W_Bruggeman | rna-NM_001182905.1_Bruggeman | cds-NP_014332.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:547077-547652:+ | gene-YNL067W_CAT1 | rna-NM_001182905.1_CAT1 | cds-NP_014332.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:494023-494598:+ | gene-YNL067W_CBS1585 | rna-NM_001182905.1_CBS1585 | cds-NP_014332.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:562442-563017:+ | gene-YNL067W_CBS436 | rna-NM_001182905.1_CBS436 | cds-NP_014332.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:489116-489691:+ | gene-YNL067W_CBS6412 | rna-NM_001182905.1_CBS6412 | cds-NP_014332.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:490432-491007:+ | gene-YNL067W_CBS6413 | rna-NM_001182905.1_CBS6413 | cds-NP_014332.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:493608-494183:+ | gene-YNL067W_CENPK1137D | rna-NM_001182905.1_CENPK1137D | cds-NP_014332.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:496174-496749:+ | gene-YNL067W_EthanolRed | rna-NM_001182905.1_EthanolRed | cds-NP_014332.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:486699-487274:+ | gene-YNL067W_FaliES1 | rna-NM_001182905.1_FaliES1 | cds-NP_014332.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000040.1:1804-2379:+ | gene-YNL067W_JAY291 | rna-NM_001182905.1_JAY291 | cds-NP_014332.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:500243-500818:+ | gene-YNL067W_MUCL30387 | rna-NM_001182905.1_MUCL30387 | cds-NP_014332.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:535643-536218:+ | gene-YNL067W_MUCL30388 | rna-NM_001182905.1_MUCL30388 | cds-NP_014332.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:491425-492000:+ | gene-YNL067W_MUCL39482 | rna-NM_001182905.1_MUCL39482 | cds-NP_014332.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:495345-495920:+ | gene-YNL067W_MUCL42920 | rna-NM_001182905.1_MUCL42920 | cds-NP_014332.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:499650-500225:+ | gene-YNL067W_NCIM3186 | rna-NM_001182905.1_NCIM3186 | cds-NP_014332.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:493476-494051:+ | gene-YNL067W_NCYC1407 | rna-NM_001182905.1_NCYC1407 | cds-NP_014332.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:496718-497293:+ | gene-YNL067W_PE2H3 | rna-NM_001182905.1_PE2H3 | cds-NP_014332.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:491793-492368:+ | gene-YNL067W_PE2H4 | rna-NM_001182905.1_PE2H4 | cds-NP_014332.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:499681-500256:+ | gene-YNL067W_S288C | rna-NM_001182905.1_S288C | cds-NP_014332.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000024.1:84637-85212:+ | gene-YNL067W_SA1 | rna-NM_001182905.1_SA1 | cds-NP_014332.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:487574-488149:+ | gene-YNL067W_ThermosaccDry | rna-NM_001182905.1_ThermosaccDry | cds-NP_014332.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:506682-507257:+ | gene-YNL067W_VR1 | rna-NM_001182905.1_VR1 | cds-NP_014332.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:396919-397494:+ | gene-YNL067W_ZTW1 | rna-NM_001182905.1_ZTW1 | cds-NP_014332.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:503153-503728:+ | gene-YNL067W_Sparadoxus | rna-NM_001182905.1_Sparadoxus | cds-NP_014332.1_Sparadoxus | 94.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |