Gene name: RPL9A
Reference locus (S288C): YGL147C
Gene biotype: protein_coding
Description: Ribosomal 60S subunit protein L9A; homologous to mammalian ribosomal protein L9 and bacterial L6; RPL9A has a paralog, RPL9B, that arose from a single-locus duplication
Top 10 interactors (score): RPL11B (0.999); RPS29B (0.999); RPL3 (0.999); RPS26B (0.999); RPS6A (0.999); RPL4A (0.999); RPL14B (0.999); RPL27A (0.999); RPL2A (0.999); RPS22A (0.999); RPS13 (0.999); RPS25B (0.999); RPL18B (0.999); RPL34A (0.999); RPL39 (0.999); RPP2A (0.999); RPL19B (0.999); RPL42A (0.999); RPS22B (0.999); RPL32 (0.999)
Homologues (species, bitscore): RPL9 (Homo sapiens, 180.6); Rpl9 (Mus musculus, 181.4); rpl9 (Danio rerio, 183.3); rpl9 (Xenopus tropicalis, 183.0); RpL9 (Drosophila melanogaster, 174.1); rpl-9 (Caenorhabditis elegans, 190.3); AT4G10450 (Arabidopsis thaliana, 188.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:230341-230916:- | gene-YGL147C_AKU4011 | rna-NM_001181012.3_AKU4011 | cds-NP_011368.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:174035-174610:+ | gene-YGL147C_BG1 | rna-NM_001181012.3_BG1 | cds-NP_011368.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:232517-233092:- | gene-YGL147C_Bruggeman | rna-NM_001181012.3_Bruggeman | cds-NP_011368.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:228358-228933:- | gene-YGL147C_CAT1 | rna-NM_001181012.3_CAT1 | cds-NP_011368.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:233723-234298:- | gene-YGL147C_CBS1585 | rna-NM_001181012.3_CBS1585 | cds-NP_011368.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:228315-228890:- | gene-YGL147C_CBS436 | rna-NM_001181012.3_CBS436 | cds-NP_011368.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:219933-220508:- | gene-YGL147C_CBS6412 | rna-NM_001181012.3_CBS6412 | cds-NP_011368.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:228279-228854:- | gene-YGL147C_CBS6413 | rna-NM_001181012.3_CBS6413 | cds-NP_011368.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:228016-228591:- | gene-YGL147C_CENPK1137D | rna-NM_001181012.3_CENPK1137D | cds-NP_011368.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:220482-221057:- | gene-YGL147C_EthanolRed | rna-NM_001181012.3_EthanolRed | cds-NP_011368.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:221728-222303:- | gene-YGL147C_FaliES1 | rna-NM_001181012.3_FaliES1 | cds-NP_011368.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000090.1:71557-72132:- | gene-YGL147C_JAY291 | rna-NM_001181012.3_JAY291 | cds-NP_011368.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:229736-230311:- | gene-YGL147C_MUCL30387 | rna-NM_001181012.3_MUCL30387 | cds-NP_011368.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:232851-233426:- | gene-YGL147C_MUCL30388 | rna-NM_001181012.3_MUCL30388 | cds-NP_011368.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:230504-231079:- | gene-YGL147C_MUCL39482 | rna-NM_001181012.3_MUCL39482 | cds-NP_011368.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:233070-233645:- | gene-YGL147C_MUCL42920 | rna-NM_001181012.3_MUCL42920 | cds-NP_011368.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:227754-228329:- | gene-YGL147C_NCIM3186 | rna-NM_001181012.3_NCIM3186 | cds-NP_011368.3_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:221994-222569:- | gene-YGL147C_NCYC1407 | rna-NM_001181012.3_NCYC1407 | cds-NP_011368.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:223860-224435:- | gene-YGL147C_PE2H3 | rna-NM_001181012.3_PE2H3 | cds-NP_011368.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:228855-229430:- | gene-YGL147C_PE2H4 | rna-NM_001181012.3_PE2H4 | cds-NP_011368.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:227754-228329:- | gene-YGL147C_S288C | rna-NM_001181012.3_S288C | cds-NP_011368.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000081.1:26420-26995:+ | gene-YGL147C_SA1 | rna-NM_001181012.3_SA1 | cds-NP_011368.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:221957-222532:- | gene-YGL147C_ThermosaccDry | rna-NM_001181012.3_ThermosaccDry | cds-NP_011368.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:228774-229349:- | gene-YGL147C_VR1 | rna-NM_001181012.3_VR1 | cds-NP_011368.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:220064-220639:- | gene-YGL147C_ZTW1 | rna-NM_001181012.3_ZTW1 | cds-NP_011368.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:226112-226687:- | gene-YGL147C_Sparadoxus | rna-NM_001181012.3_Sparadoxus | cds-NP_011368.3_Sparadoxus | 96.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |