Gene name: RPL37A
Reference locus (S288C): YLR185W
Gene biotype: protein_coding
Description: Ribosomal 60S subunit protein L37A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L37, no bacterial homolog; RPL37A has a paralog, RPL37B, that arose from the whole genome duplication
Top 10 interactors (score): RPL36B (0.999); RPS14A (0.999); RPS11B (0.999); RPP1A (0.999); RPL6B (0.999); RPL2B (0.999); RPS15 (0.999); RPL31A (0.999); RPS16A (0.999); RPL36A (0.999); RPS18B (0.999); RPL23B (0.999); RPS0B (0.999); RPL26B (0.999); RPS6B (0.999); RPL26A (0.999); RPS9B (0.999); RPS28A (0.999); RPL28 (0.999); RPS19B (0.999)
Homologues (species, bitscore): RPL37 (Homo sapiens, 116.7); Rpl37 (Mus musculus, 116.7); rpl37 (Danio rerio, 117.9); rpl37 (Xenopus tropicalis, 118.6); RpL37a (Drosophila melanogaster, 130.2); W01D2.1 (Caenorhabditis elegans, 120.2); AT3G16080 (Arabidopsis thaliana, 129.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:476784-477409:+ | gene-YLR185W_AKU4011 | rna-NM_001182072.1_AKU4011 | cds-NP_013286.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000177.1:33982-34607:+ | gene-YLR185W_BG1 | rna-NM_001182072.1_BG1 | cds-NP_013286.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:517032-517657:+ | gene-YLR185W_Bruggeman | rna-NM_001182072.1_Bruggeman | cds-NP_013286.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:516628-517253:+ | gene-YLR185W_CAT1 | rna-NM_001182072.1_CAT1 | cds-NP_013286.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:512280-512905:+ | gene-YLR185W_CBS1585 | rna-NM_001182072.1_CBS1585 | cds-NP_013286.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:502418-503043:+ | gene-YLR185W_CBS436 | rna-NM_001182072.1_CBS436 | cds-NP_013286.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:480837-481462:+ | gene-YLR185W_CBS6412 | rna-NM_001182072.1_CBS6412 | cds-NP_013286.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:512572-513197:+ | gene-YLR185W_CBS6413 | rna-NM_001182072.1_CBS6413 | cds-NP_013286.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:507314-507939:+ | gene-YLR185W_CENPK1137D | rna-NM_001182072.1_CENPK1137D | cds-NP_013286.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:476309-476934:+ | gene-YLR185W_EthanolRed | rna-NM_001182072.1_EthanolRed | cds-NP_013286.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:505236-505861:+ | gene-YLR185W_FaliES1 | rna-NM_001182072.1_FaliES1 | cds-NP_013286.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000004.1:32137-32762:+ | gene-YLR185W_JAY291 | rna-NM_001182072.1_JAY291 | cds-NP_013286.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:517053-517678:+ | gene-YLR185W_MUCL30387 | rna-NM_001182072.1_MUCL30387 | cds-NP_013286.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:521985-522610:+ | gene-YLR185W_MUCL30388 | rna-NM_001182072.1_MUCL30388 | cds-NP_013286.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:513261-513886:+ | gene-YLR185W_MUCL39482 | rna-NM_001182072.1_MUCL39482 | cds-NP_013286.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:513757-514382:+ | gene-YLR185W_MUCL42920 | rna-NM_001182072.1_MUCL42920 | cds-NP_013286.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:522637-523262:+ | gene-YLR185W_NCIM3186 | rna-NM_001182072.1_NCIM3186 | cds-NP_013286.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:505688-506313:+ | gene-YLR185W_NCYC1407 | rna-NM_001182072.1_NCYC1407 | cds-NP_013286.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:509926-510551:+ | gene-YLR185W_PE2H3 | rna-NM_001182072.1_PE2H3 | cds-NP_013286.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:509670-510295:+ | gene-YLR185W_PE2H4 | rna-NM_001182072.1_PE2H4 | cds-NP_013286.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:522663-523288:+ | gene-YLR185W_S288C | rna-NM_001182072.1_S288C | cds-NP_013286.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000042.1:32195-32820:+ | gene-YLR185W_SA1 | rna-NM_001182072.1_SA1 | cds-NP_013286.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:507739-508364:+ | gene-YLR185W_ThermosaccDry | rna-NM_001182072.1_ThermosaccDry | cds-NP_013286.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:519039-519664:+ | gene-YLR185W_VR1 | rna-NM_001182072.1_VR1 | cds-NP_013286.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:32029-32654:+ | gene-YLR185W_ZTW1 | rna-NM_001182072.1_ZTW1 | cds-NP_013286.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:493856-494490:+ | gene-YLR185W_Sparadoxus | rna-NM_001182072.1_Sparadoxus | cds-NP_013286.1_Sparadoxus | 98.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |