Gene name: RPL36A
Reference locus (S288C): YMR194W
Gene biotype: protein_coding
Description: Ribosomal 60S subunit protein L36A; N-terminally acetylated; binds to 5.8 S rRNA; homologous to mammalian ribosomal protein L36, no bacterial homolog; RPL36A has a paralog, RPL36B, that arose from the whole genome duplication
Top 10 interactors (score): RPS29B (0.999); RPL11B (0.999); RPP2A (0.999); RPL39 (0.999); RPL34A (0.999); RPL18B (0.999); RPL42A (0.999); RPL19B (0.999); RPL8A (0.999); RPL32 (0.999); RPL2A (0.999); RPS17A (0.999); RPS23B (0.999); RPS22A (0.999); RPS30B (0.999); RPS20 (0.999); RPS13 (0.999); RPL11A (0.999); RPS21A (0.999); RPS25B (0.999)
Homologues (species, bitscore): RPL36 (Homo sapiens, 96.3); Rpl36 (Mus musculus, 96.3); rpl36 (Danio rerio, 94.0); rpl36 (Xenopus tropicalis, 95.1); RpL36 (Drosophila melanogaster, 77.8); rpl-36 (Caenorhabditis elegans, 93.6); AT2G37600 (Arabidopsis thaliana, 94.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:691060-691825:+ | gene-YMR194W_AKU4011 | rna-NM_001182701.1_AKU4011 | cds-NP_013920.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:262758-263523:- | gene-YMR194W_BG1 | rna-NM_001182701.1_BG1 | cds-NP_013920.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:635290-636054:+ | gene-YMR194W_Bruggeman | rna-NM_001182701.1_Bruggeman | cds-NP_013920.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:638538-639302:+ | gene-YMR194W_CAT1 | rna-NM_001182701.1_CAT1 | cds-NP_013920.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:623316-624081:+ | gene-YMR194W_CBS1585 | rna-NM_001182701.1_CBS1585 | cds-NP_013920.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:627585-628349:+ | gene-YMR194W_CBS436 | rna-NM_001182701.1_CBS436 | cds-NP_013920.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:734875-735640:+ | gene-YMR194W_CBS6412 | rna-NM_001182701.1_CBS6412 | cds-NP_013920.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:622467-623232:+ | gene-YMR194W_CBS6413 | rna-NM_001182701.1_CBS6413 | cds-NP_013920.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:645834-646599:+ | gene-YMR194W_CENPK1137D | rna-NM_001182701.1_CENPK1137D | cds-NP_013920.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:683507-684272:+ | gene-YMR194W_EthanolRed | rna-NM_001182701.1_EthanolRed | cds-NP_013920.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:629163-629928:+ | gene-YMR194W_FaliES1 | rna-NM_001182701.1_FaliES1 | cds-NP_013920.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000141.1:156074-156839:- | gene-YMR194W_JAY291 | rna-NM_001182701.1_JAY291 | cds-NP_013920.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:628836-629600:+ | gene-YMR194W_MUCL30387 | rna-NM_001182701.1_MUCL30387 | cds-NP_013920.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:635617-636381:+ | gene-YMR194W_MUCL30388 | rna-NM_001182701.1_MUCL30388 | cds-NP_013920.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:624388-625153:+ | gene-YMR194W_MUCL39482 | rna-NM_001182701.1_MUCL39482 | cds-NP_013920.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:631735-632499:+ | gene-YMR194W_MUCL42920 | rna-NM_001182701.1_MUCL42920 | cds-NP_013920.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:651099-651864:+ | gene-YMR194W_NCIM3186 | rna-NM_001182701.1_NCIM3186 | cds-NP_013920.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:624040-624805:+ | gene-YMR194W_NCYC1407 | rna-NM_001182701.1_NCYC1407 | cds-NP_013920.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:633929-634693:+ | gene-YMR194W_PE2H3 | rna-NM_001182701.1_PE2H3 | cds-NP_013920.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:634916-635681:+ | gene-YMR194W_PE2H4 | rna-NM_001182701.1_PE2H4 | cds-NP_013920.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:651145-651910:+ | gene-YMR194W_S288C | rna-NM_001182701.1_S288C | cds-NP_013920.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:156201-156966:- | gene-YMR194W_SA1 | rna-NM_001182701.1_SA1 | cds-NP_013920.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:625289-626054:+ | gene-YMR194W_ThermosaccDry | rna-NM_001182701.1_ThermosaccDry | cds-NP_013920.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:638462-639226:+ | gene-YMR194W_VR1 | rna-NM_001182701.1_VR1 | cds-NP_013920.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:41075-41839:+ | gene-YMR194W_ZTW1 | rna-NM_001182701.1_ZTW1 | cds-NP_013920.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:643180-643942:+ | gene-YMR194W_Sparadoxus | rna-NM_001182701.1_Sparadoxus | cds-NP_013920.1_Sparadoxus | 96.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |