Gene name: RPL2B
Reference locus (S288C): YIL018W
Gene biotype: protein_coding
Description: Ribosomal 60S subunit protein L2B; homologous to mammalian ribosomal protein L2 and bacterial L2; RPL2B has a paralog, RPL2A, that arose from the whole genome duplication; expression is upregulated at low temperatures
Top 10 interactors (score): RPL13A (0.999); RPL27B (0.999); RPS14B (0.999); RPS18A (0.999); RPL16A (0.999); RPL15A (0.999); RPL6A (0.999); RPL1A (0.999); RPL8B (0.999); RPL40B (0.999); RPL9B (0.999); RPS4A (0.999); RPL34B (0.999); RPS23A (0.999); RPL37B (0.999); RPL12A (0.999); RPS3 (0.999); RPS2 (0.999); RPL20A (0.999); RPL35A (0.999)
Homologues (species, bitscore): RPL8 (Homo sapiens, 392.9); Rpl8 (Mus musculus, 392.9); rpl8 (Danio rerio, 393.7); rpl8 (Xenopus tropicalis, 392.5); RpL8 (Drosophila melanogaster, 382.5); rpl-2 (Caenorhabditis elegans, 359.4); EMB2296 (Arabidopsis thaliana, 360.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:315227-316391:+ | gene-YIL018W_AKU4011 | rna-NM_001179368.1_AKU4011 | cds-NP_012246.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:175052-176122:+ | gene-YIL018W_BG1 | rna-NM_001179368.1_BG1 | cds-NP_012246.1_BG1 | 87.7 | 87.7 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:320370-321534:+ | gene-YIL018W_Bruggeman | rna-NM_001179368.1_Bruggeman | cds-NP_012246.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:307786-308950:+ | gene-YIL018W_CAT1 | rna-NM_001179368.1_CAT1 | cds-NP_012246.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:315318-316482:+ | gene-YIL018W_CBS1585 | rna-NM_001179368.1_CBS1585 | cds-NP_012246.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:308750-309914:+ | gene-YIL018W_CBS436 | rna-NM_001179368.1_CBS436 | cds-NP_012246.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:310850-312014:+ | gene-YIL018W_CBS6412 | rna-NM_001179368.1_CBS6412 | cds-NP_012246.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:307232-308396:+ | gene-YIL018W_CBS6413 | rna-NM_001179368.1_CBS6413 | cds-NP_012246.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:308678-309842:+ | gene-YIL018W_CENPK1137D | rna-NM_001179368.1_CENPK1137D | cds-NP_012246.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:298192-299356:+ | gene-YIL018W_EthanolRed | rna-NM_001179368.1_EthanolRed | cds-NP_012246.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:316103-317267:+ | gene-YIL018W_FaliES1 | rna-NM_001179368.1_FaliES1 | cds-NP_012246.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000098.1:1-883:- | gene-YIL018W_JAY291 | rna-NM_001179368.1_JAY291 | cds-NP_012246.1_JAY291 | 63.2 | 63.2 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:317220-318384:+ | gene-YIL018W_MUCL30387 | rna-NM_001179368.1_MUCL30387 | cds-NP_012246.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:313325-314489:+ | gene-YIL018W_MUCL30388 | rna-NM_001179368.1_MUCL30388 | cds-NP_012246.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:315907-317071:+ | gene-YIL018W_MUCL39482 | rna-NM_001179368.1_MUCL39482 | cds-NP_012246.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:319041-320205:+ | gene-YIL018W_MUCL42920 | rna-NM_001179368.1_MUCL42920 | cds-NP_012246.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:316768-317932:+ | gene-YIL018W_NCIM3186 | rna-NM_001179368.1_NCIM3186 | cds-NP_012246.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:320180-321344:+ | gene-YIL018W_NCYC1407 | rna-NM_001179368.1_NCYC1407 | cds-NP_012246.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:311821-312985:+ | gene-YIL018W_PE2H3 | rna-NM_001179368.1_PE2H3 | cds-NP_012246.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:306527-307691:+ | gene-YIL018W_PE2H4 | rna-NM_001179368.1_PE2H4 | cds-NP_012246.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:316768-317932:+ | gene-YIL018W_S288C | rna-NM_001179368.1_S288C | cds-NP_012246.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:6599-7763:- | gene-YIL018W_SA1 | rna-NM_001179368.1_SA1 | cds-NP_012246.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:314773-315937:+ | gene-YIL018W_ThermosaccDry | rna-NM_001179368.1_ThermosaccDry | cds-NP_012246.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:311410-312574:+ | gene-YIL018W_VR1 | rna-NM_001179368.1_VR1 | cds-NP_012246.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:289194-290358:+ | gene-YIL018W_ZTW1 | rna-NM_001179368.1_ZTW1 | cds-NP_012246.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:309899-311057:+ | gene-YIL018W_Sparadoxus | rna-NM_001179368.1_Sparadoxus | cds-NP_012246.1_Sparadoxus | 98.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |