Gene name: RPL26B
Reference locus (S288C): YGR034W
Gene biotype: protein_coding
Description: Ribosomal 60S subunit protein L26B; binds to 5.8S rRNA; non-essential even when paralog is also deleted; deletion has minimal affections on ribosome biosynthesis; homologous to mammalian ribosomal protein L26 and bacterial L24; RPL26B has a paralog, RPL26A, that arose from the whole genome duplication
Top 10 interactors (score): RPL4B (0.999); RPL19A (0.999); RPS12 (0.999); RPS10A (0.999); RPL30 (0.999); RPL6A (0.999); RPS18A (0.999); RPL12A (0.999); RPL16A (0.999); RPL15A (0.999); RPL1A (0.999); RPL27B (0.999); RPL8B (0.999); RPL9B (0.999); RPL40B (0.999); RPL35A (0.999); RPL20A (0.999); RPS3 (0.999); RPS2 (0.999); RPL37B (0.999)
Homologues (species, bitscore): RPL26L1 (Homo sapiens, 137.9); Rpl26 (Mus musculus, 137.9); rpl26 (Danio rerio, 138.3); rpl26 (Xenopus tropicalis, 137.5); RpL26 (Drosophila melanogaster, 140.2); rpl-26 (Caenorhabditis elegans, 152.5); AT3G49910 (Arabidopsis thaliana, 152.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:551431-552274:+ | gene-YGR034W_AKU4011 | rna-NM_001181163.1_AKU4011 | cds-NP_011548.2_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:23578-24418:- | gene-YGR034W_BG1 | rna-NM_001181163.1_BG1 | cds-NP_011548.2_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:553698-554546:+ | gene-YGR034W_Bruggeman | rna-NM_001181163.1_Bruggeman | cds-NP_011548.2_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:551758-552609:+ | gene-YGR034W_CAT1 | rna-NM_001181163.1_CAT1 | cds-NP_011548.2_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:552751-553586:+ | gene-YGR034W_CBS1585 | rna-NM_001181163.1_CBS1585 | cds-NP_011548.2_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:547538-548392:+ | gene-YGR034W_CBS436 | rna-NM_001181163.1_CBS436 | cds-NP_011548.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:545508-546364:+ | gene-YGR034W_CBS6412 | rna-NM_001181163.1_CBS6412 | cds-NP_011548.2_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:549998-550362:+ | gene-YGR034W_CBS6413 | rna-NM_001181163.1_CBS6413 | cds-NP_011548.2_CBS6413 | 95.0 | 95.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:555651-556498:+ | gene-YGR034W_CENPK1137D | rna-NM_001181163.1_CENPK1137D | cds-NP_011548.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:539638-540493:+ | gene-YGR034W_EthanolRed | rna-NM_001181163.1_EthanolRed | cds-NP_011548.2_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:543125-543978:+ | gene-YGR034W_FaliES1 | rna-NM_001181163.1_FaliES1 | cds-NP_011548.2_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000020.1:81825-82682:+ | gene-YGR034W_JAY291 | rna-NM_001181163.1_JAY291 | cds-NP_011548.2_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:550332-551183:+ | gene-YGR034W_MUCL30387 | rna-NM_001181163.1_MUCL30387 | cds-NP_011548.2_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:552951-553799:+ | gene-YGR034W_MUCL30388 | rna-NM_001181163.1_MUCL30388 | cds-NP_011548.2_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:548573-549408:+ | gene-YGR034W_MUCL39482 | rna-NM_001181163.1_MUCL39482 | cds-NP_011548.2_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:558366-559198:+ | gene-YGR034W_MUCL42920 | rna-NM_001181163.1_MUCL42920 | cds-NP_011548.2_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:555812-556672:+ | gene-YGR034W_NCIM3186 | rna-NM_001181163.1_NCIM3186 | cds-NP_011548.2_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:542759-543601:+ | gene-YGR034W_NCYC1407 | rna-NM_001181163.1_NCYC1407 | cds-NP_011548.2_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:545647-546507:+ | gene-YGR034W_PE2H3 | rna-NM_001181163.1_PE2H3 | cds-NP_011548.2_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:550754-551614:+ | gene-YGR034W_PE2H4 | rna-NM_001181163.1_PE2H4 | cds-NP_011548.2_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:555812-556672:+ | gene-YGR034W_S288C | rna-NM_001181163.1_S288C | cds-NP_011548.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000021.1:5264-6103:- | gene-YGR034W_SA1 | rna-NM_001181163.1_SA1 | cds-NP_011548.2_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:562462-563314:+ | gene-YGR034W_ThermosaccDry | rna-NM_001181163.1_ThermosaccDry | cds-NP_011548.2_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:652917-653738:+ | gene-YGR034W_VR1 | rna-NM_001181163.1_VR1 | cds-NP_011548.2_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:17944-18797:+ | gene-YGR034W_ZTW1 | rna-NM_001181163.1_ZTW1 | cds-NP_011548.2_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:552005-552844:+ | gene-YGR034W_Sparadoxus | rna-NM_001181163.1_Sparadoxus | cds-NP_011548.2_Sparadoxus | 98.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |