Gene name: RPL24B
Reference locus (S288C): YGR148C
Gene biotype: protein_coding
Description: Ribosomal 60S subunit protein L24B; not essential for translation but may be required for normal translation rate; homologous to mammalian ribosomal protein L24, no bacterial homolog; RPL24B has a paralog, RPL24A, that arose from the whole genome duplication
Top 10 interactors (score): RPL33A (0.999); RPS8B (0.999); RPL27A (0.999); RPL14B (0.999); RPL4A (0.999); RPS6A (0.999); RPS26B (0.999); RPL3 (0.999); RPS29B (0.999); RPL11B (0.999); RPL32 (0.999); RPL42A (0.999); RPL19B (0.999); RPL39 (0.999); RPL34A (0.999); RPL18B (0.999); RPS25B (0.999); RPS13 (0.999); RPS22A (0.999); RPL2A (0.999)
Homologues (species, bitscore): RPL24 (Homo sapiens, 141.0); Rpl24 (Mus musculus, 141.0); rpl24 (Danio rerio, 141.7); rpl24 (Xenopus tropicalis, 90.1); RpL24 (Drosophila melanogaster, 129.8); rpl-24.1 (Caenorhabditis elegans, 85.9); STV1 (Arabidopsis thaliana, 117.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:767012-767479:- | gene-YGR148C_AKU4011 | rna-NM_001181277.3_AKU4011 | cds-NP_011664.3_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:44930-45397:- | gene-YGR148C_BG1 | rna-NM_001181277.3_BG1 | cds-NP_011664.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:772480-772947:- | gene-YGR148C_Bruggeman | rna-NM_001181277.3_Bruggeman | cds-NP_011664.3_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:768437-768904:- | gene-YGR148C_CAT1 | rna-NM_001181277.3_CAT1 | cds-NP_011664.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:767746-768213:- | gene-YGR148C_CBS1585 | rna-NM_001181277.3_CBS1585 | cds-NP_011664.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:771398-771865:- | gene-YGR148C_CBS436 | rna-NM_001181277.3_CBS436 | cds-NP_011664.3_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:758766-759233:- | gene-YGR148C_CBS6412 | rna-NM_001181277.3_CBS6412 | cds-NP_011664.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:764604-765071:- | gene-YGR148C_CBS6413 | rna-NM_001181277.3_CBS6413 | cds-NP_011664.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:787045-787512:- | gene-YGR148C_CENPK1137D | rna-NM_001181277.3_CENPK1137D | cds-NP_011664.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:753314-753781:- | gene-YGR148C_EthanolRed | rna-NM_001181277.3_EthanolRed | cds-NP_011664.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:757402-757869:- | gene-YGR148C_FaliES1 | rna-NM_001181277.3_FaliES1 | cds-NP_011664.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000224.1:1-163:+ | gene-YGR148C_JAY291 | rna-NM_001181277.3_JAY291 | cds-NP_011664.3_JAY291 | 34.8 | 34.8 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:770222-770689:- | gene-YGR148C_MUCL30387 | rna-NM_001181277.3_MUCL30387 | cds-NP_011664.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:769914-770381:- | gene-YGR148C_MUCL30388 | rna-NM_001181277.3_MUCL30388 | cds-NP_011664.3_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:763222-763689:- | gene-YGR148C_MUCL39482 | rna-NM_001181277.3_MUCL39482 | cds-NP_011664.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:777653-778120:- | gene-YGR148C_MUCL42920 | rna-NM_001181277.3_MUCL42920 | cds-NP_011664.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:787312-787779:- | gene-YGR148C_NCIM3186 | rna-NM_001181277.3_NCIM3186 | cds-NP_011664.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:758422-758889:- | gene-YGR148C_NCYC1407 | rna-NM_001181277.3_NCYC1407 | cds-NP_011664.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:777391-777858:- | gene-YGR148C_PE2H3 | rna-NM_001181277.3_PE2H3 | cds-NP_011664.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:782501-782968:- | gene-YGR148C_PE2H4 | rna-NM_001181277.3_PE2H4 | cds-NP_011664.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:787312-787779:- | gene-YGR148C_S288C | rna-NM_001181277.3_S288C | cds-NP_011664.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000035.1:22314-22781:- | gene-YGR148C_SA1 | rna-NM_001181277.3_SA1 | cds-NP_011664.3_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:778025-778492:- | gene-YGR148C_ThermosaccDry | rna-NM_001181277.3_ThermosaccDry | cds-NP_011664.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:882298-882765:- | gene-YGR148C_VR1 | rna-NM_001181277.3_VR1 | cds-NP_011664.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:79873-80340:- | gene-YGR148C_ZTW1 | rna-NM_001181277.3_ZTW1 | cds-NP_011664.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:767294-767761:- | gene-YGR148C_Sparadoxus | rna-NM_001181277.3_Sparadoxus | cds-NP_011664.3_Sparadoxus | 96.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |