Gene name: RPL24A
Reference locus (S288C): YGL031C
Gene biotype: protein_coding
Description: Ribosomal 60S subunit protein L24A; not essential for translation but may be required for normal translation rate; homologous to mammalian ribosomal protein L24, no bacterial homolog; RPL24A has a paralog, RPL24B, that arose from the whole genome duplication
Top 10 interactors (score): RPS4A (0.999); RPL40B (0.999); RPL9B (0.999); RPL35A (0.999); RPL8B (0.999); RPS11A (0.999); RPS10A (0.999); RPL19A (0.999); RPS12 (0.999); RPS8A (0.999); RPL13B (0.999); RPS16B (0.999); RPL33B (0.999); RPL4B (0.999); RPS4B (0.999); RPL30 (0.999); RPS23A (0.999); RPL34B (0.999); RPL21B (0.999); RPS10B (0.999)
Homologues (species, bitscore): RPL24 (Homo sapiens, 142.1); Rpl24 (Mus musculus, 142.1); rpl24 (Danio rerio, 142.5); rpl24 (Xenopus tropicalis, 92.0); RpL24 (Drosophila melanogaster, 128.6); rpl-24.1 (Caenorhabditis elegans, 87.4); STV1 (Arabidopsis thaliana, 119.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:439521-439988:- | gene-YGL031C_AKU4011 | rna-NM_001180896.1_AKU4011 | cds-NP_011484.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:136146-136613:+ | gene-YGL031C_BG1 | rna-NM_001180896.1_BG1 | cds-NP_011484.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:440285-440752:- | gene-YGL031C_Bruggeman | rna-NM_001180896.1_Bruggeman | cds-NP_011484.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:438526-438993:- | gene-YGL031C_CAT1 | rna-NM_001180896.1_CAT1 | cds-NP_011484.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:440991-441458:- | gene-YGL031C_CBS1585 | rna-NM_001180896.1_CBS1585 | cds-NP_011484.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:435388-435855:- | gene-YGL031C_CBS436 | rna-NM_001180896.1_CBS436 | cds-NP_011484.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:433596-434063:- | gene-YGL031C_CBS6412 | rna-NM_001180896.1_CBS6412 | cds-NP_011484.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:437662-438129:- | gene-YGL031C_CBS6413 | rna-NM_001180896.1_CBS6413 | cds-NP_011484.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:437306-437773:- | gene-YGL031C_CENPK1137D | rna-NM_001180896.1_CENPK1137D | cds-NP_011484.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:427864-428331:- | gene-YGL031C_EthanolRed | rna-NM_001180896.1_EthanolRed | cds-NP_011484.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:431102-431569:- | gene-YGL031C_FaliES1 | rna-NM_001180896.1_FaliES1 | cds-NP_011484.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000177.1:1-305:- | gene-YGL031C_JAY291 | rna-NM_001180896.1_JAY291 | cds-NP_011484.1_JAY291 | 64.7 | 65.1 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:437490-437957:- | gene-YGL031C_MUCL30387 | rna-NM_001180896.1_MUCL30387 | cds-NP_011484.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:440288-440755:- | gene-YGL031C_MUCL30388 | rna-NM_001180896.1_MUCL30388 | cds-NP_011484.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:436829-437296:- | gene-YGL031C_MUCL39482 | rna-NM_001180896.1_MUCL39482 | cds-NP_011484.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:446286-446753:- | gene-YGL031C_MUCL42920 | rna-NM_001180896.1_MUCL42920 | cds-NP_011484.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:437467-437934:- | gene-YGL031C_NCIM3186 | rna-NM_001180896.1_NCIM3186 | cds-NP_011484.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:430837-431304:- | gene-YGL031C_NCYC1407 | rna-NM_001180896.1_NCYC1407 | cds-NP_011484.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:433502-433969:- | gene-YGL031C_PE2H3 | rna-NM_001180896.1_PE2H3 | cds-NP_011484.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:438552-439019:- | gene-YGL031C_PE2H4 | rna-NM_001180896.1_PE2H4 | cds-NP_011484.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:437467-437934:- | gene-YGL031C_S288C | rna-NM_001180896.1_S288C | cds-NP_011484.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000021.1:117663-118130:+ | gene-YGL031C_SA1 | rna-NM_001180896.1_SA1 | cds-NP_011484.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:450468-450935:- | gene-YGL031C_ThermosaccDry | rna-NM_001180896.1_ThermosaccDry | cds-NP_011484.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:540540-541007:- | gene-YGL031C_VR1 | rna-NM_001180896.1_VR1 | cds-NP_011484.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:429064-429531:- | gene-YGL031C_ZTW1 | rna-NM_001180896.1_ZTW1 | cds-NP_011484.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:438231-438698:- | gene-YGL031C_Sparadoxus | rna-NM_001180896.1_Sparadoxus | cds-NP_011484.1_Sparadoxus | 96.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |