Gene name: RPL21A
Reference locus (S288C): YBR191W
Gene biotype: protein_coding
Description: Ribosomal 60S subunit protein L21A; homologous to mammalian ribosomal protein L21, no bacterial homolog; RPL21A has a paralog, RPL21B, that arose from the whole genome duplication
Top 10 interactors (score): RPL9B (0.999); RPL6A (0.999); RPL2B (0.999); RPS3 (0.999); RPS2 (0.999); RPS19B (0.999); RPL20A (0.999); RPL6B (0.999); RPP1A (0.999); RPS11B (0.999); RPS14A (0.999); RPS15 (0.999); RPL16A (0.999); RPL15A (0.999); RPL36B (0.999); RPS18A (0.999); RPL27B (0.999); RPL13A (0.999); RPL1A (0.999); RPS14B (0.999)
Homologues (species, bitscore): RPL21 (Homo sapiens, 199.5); Rpl21 (Mus musculus, 200.3); rpl21 (Danio rerio, 203.0); rpl21 (Xenopus tropicalis, 204.9); RpL21 (Drosophila melanogaster, 181.4); rpl-21 (Caenorhabditis elegans, 180.3); AT1G57660 (Arabidopsis thaliana, 172.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:589639-590509:+ | gene-YBR191W_AKU4011 | rna-NM_001178539.1_AKU4011 | cds-NP_009750.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:579645-580515:+ | gene-YBR191W_BG1 | rna-NM_001178539.1_BG1 | cds-NP_009750.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:395498-396368:+ | gene-YBR191W_Bruggeman | rna-NM_001178539.1_Bruggeman | cds-NP_009750.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:594906-595776:+ | gene-YBR191W_CAT1 | rna-NM_001178539.1_CAT1 | cds-NP_009750.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:581420-582290:+ | gene-YBR191W_CBS1585 | rna-NM_001178539.1_CBS1585 | cds-NP_009750.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:588971-589841:+ | gene-YBR191W_CBS436 | rna-NM_001178539.1_CBS436 | cds-NP_009750.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:678029-678899:+ | gene-YBR191W_CBS6412 | rna-NM_001178539.1_CBS6412 | cds-NP_009750.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:587226-588096:+ | gene-YBR191W_CBS6413 | rna-NM_001178539.1_CBS6413 | cds-NP_009750.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:600044-600914:+ | gene-YBR191W_CENPK1137D | rna-NM_001178539.1_CENPK1137D | cds-NP_009750.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:714796-715666:+ | gene-YBR191W_EthanolRed | rna-NM_001178539.1_EthanolRed | cds-NP_009750.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:605707-606577:+ | gene-YBR191W_FaliES1 | rna-NM_001178539.1_FaliES1 | cds-NP_009750.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000023.1:1-183:+ | gene-YBR191W_JAY291 | rna-NM_001178539.1_JAY291 | cds-NP_009750.1_JAY291 | 37.2 | 37.8 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:594179-595049:+ | gene-YBR191W_MUCL30387 | rna-NM_001178539.1_MUCL30387 | cds-NP_009750.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:611254-612124:+ | gene-YBR191W_MUCL30388 | rna-NM_001178539.1_MUCL30388 | cds-NP_009750.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:579793-580663:+ | gene-YBR191W_MUCL39482 | rna-NM_001178539.1_MUCL39482 | cds-NP_009750.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:589215-590085:+ | gene-YBR191W_MUCL42920 | rna-NM_001178539.1_MUCL42920 | cds-NP_009750.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:606067-606937:+ | gene-YBR191W_NCIM3186 | rna-NM_001178539.1_NCIM3186 | cds-NP_009750.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:581901-582771:+ | gene-YBR191W_NCYC1407 | rna-NM_001178539.1_NCYC1407 | cds-NP_009750.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:594517-595387:+ | gene-YBR191W_PE2H3 | rna-NM_001178539.1_PE2H3 | cds-NP_009750.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:592193-593063:+ | gene-YBR191W_PE2H4 | rna-NM_001178539.1_PE2H4 | cds-NP_009750.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:606270-607140:+ | gene-YBR191W_S288C | rna-NM_001178539.1_S288C | cds-NP_009750.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000080.1:13967-14837:+ | gene-YBR191W_SA1 | rna-NM_001178539.1_SA1 | cds-NP_009750.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:604717-605587:+ | gene-YBR191W_ThermosaccDry | rna-NM_001178539.1_ThermosaccDry | cds-NP_009750.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:585892-586762:+ | gene-YBR191W_VR1 | rna-NM_001178539.1_VR1 | cds-NP_009750.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:579333-580203:+ | gene-YBR191W_ZTW1 | rna-NM_001178539.1_ZTW1 | cds-NP_009750.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:621239-622121:+ | gene-YBR191W_Sparadoxus | rna-NM_001178539.1_Sparadoxus | cds-NP_009750.1_Sparadoxus | 98.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |