Gene name: RPL14A
Reference locus (S288C): YKL006W
Gene biotype: protein_coding
Description: Ribosomal 60S subunit protein L14A; N-terminally acetylated; homologous to mammalian ribosomal protein L14, no bacterial homolog; RPL14A has a paralog, RPL14B, that arose from the whole genome duplication
Top 10 interactors (score): RPS22A (0.999); RPS30A (0.999); RPL20B (0.999); RPL34A (0.999); RPL18B (0.999); RPL39 (0.999); RPP2A (0.999); RPL42A (0.999); RPL19B (0.999); RPL32 (0.999); RPL2A (0.999); RPS13 (0.999); RPS25B (0.999); RPS26B (0.999); RPS6A (0.999); RPL4A (0.999); RPL27A (0.999); RPL11B (0.999); RPS29B (0.999); RPL3 (0.999)
Homologues (species, bitscore): RPL14 (Homo sapiens, 109.4); Rpl14 (Mus musculus, 112.5); rpl14 (Danio rerio, 110.2); rpl14 (Xenopus tropicalis, 115.2); RpL14 (Drosophila melanogaster, 89.0); rpl-14 (Caenorhabditis elegans, 105.9); AT2G20450 (Arabidopsis thaliana, 91.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:417923-418738:+ | gene-YKL006W_AKU4011 | rna-NM_001179572.1_AKU4011 | cds-NP_012920.1_AKU4011 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:225181-225994:- | gene-YKL006W_BG1 | rna-NM_001179572.1_BG1 | cds-NP_012920.1_BG1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:439614-440427:+ | gene-YKL006W_Bruggeman | rna-NM_001179572.1_Bruggeman | cds-NP_012920.1_Bruggeman | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:434721-435534:+ | gene-YKL006W_CAT1 | rna-NM_001179572.1_CAT1 | cds-NP_012920.1_CAT1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:430642-431456:+ | gene-YKL006W_CBS1585 | rna-NM_001179572.1_CBS1585 | cds-NP_012920.1_CBS1585 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:429492-430305:+ | gene-YKL006W_CBS436 | rna-NM_001179572.1_CBS436 | cds-NP_012920.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:414799-415614:+ | gene-YKL006W_CBS6412 | rna-NM_001179572.1_CBS6412 | cds-NP_012920.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:430497-431311:+ | gene-YKL006W_CBS6413 | rna-NM_001179572.1_CBS6413 | cds-NP_012920.1_CBS6413 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:431583-432397:+ | gene-YKL006W_CENPK1137D | rna-NM_001179572.1_CENPK1137D | cds-NP_012920.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:428404-429218:+ | gene-YKL006W_EthanolRed | rna-NM_001179572.1_EthanolRed | cds-NP_012920.1_EthanolRed | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:430494-431308:+ | gene-YKL006W_FaliES1 | rna-NM_001179572.1_FaliES1 | cds-NP_012920.1_FaliES1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000142.1:5-556:- | gene-YKL006W_JAY291 | rna-NM_001179572.1_JAY291 | cds-NP_012920.1_JAY291 | 55.8 | 70.1 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:438932-439745:+ | gene-YKL006W_MUCL30387 | rna-NM_001179572.1_MUCL30387 | cds-NP_012920.1_MUCL30387 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:434539-435352:+ | gene-YKL006W_MUCL30388 | rna-NM_001179572.1_MUCL30388 | cds-NP_012920.1_MUCL30388 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:429959-430773:+ | gene-YKL006W_MUCL39482 | rna-NM_001179572.1_MUCL39482 | cds-NP_012920.1_MUCL39482 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:435776-436589:+ | gene-YKL006W_MUCL42920 | rna-NM_001179572.1_MUCL42920 | cds-NP_012920.1_MUCL42920 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:431895-432709:+ | gene-YKL006W_NCIM3186 | rna-NM_001179572.1_NCIM3186 | cds-NP_012920.1_NCIM3186 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:430167-430981:+ | gene-YKL006W_NCYC1407 | rna-NM_001179572.1_NCYC1407 | cds-NP_012920.1_NCYC1407 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:454829-455642:+ | gene-YKL006W_PE2H3 | rna-NM_001179572.1_PE2H3 | cds-NP_012920.1_PE2H3 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:439570-440383:+ | gene-YKL006W_PE2H4 | rna-NM_001179572.1_PE2H4 | cds-NP_012920.1_PE2H4 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:431906-432720:+ | gene-YKL006W_S288C | rna-NM_001179572.1_S288C | cds-NP_012920.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000027.1:110172-110985:+ | gene-YKL006W_SA1 | rna-NM_001179572.1_SA1 | cds-NP_012920.1_SA1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:430593-431407:+ | gene-YKL006W_ThermosaccDry | rna-NM_001179572.1_ThermosaccDry | cds-NP_012920.1_ThermosaccDry | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:429851-430664:+ | gene-YKL006W_VR1 | rna-NM_001179572.1_VR1 | cds-NP_012920.1_VR1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:428637-429451:+ | gene-YKL006W_ZTW1 | rna-NM_001179572.1_ZTW1 | cds-NP_012920.1_ZTW1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:453586-454398:+ | gene-YKL006W_Sparadoxus | rna-NM_001179572.1_Sparadoxus | cds-NP_012920.1_Sparadoxus | 97.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |