Gene name: RPL10
Reference locus (S288C): YLR075W
Gene biotype: protein_coding
Description: Ribosomal 60S subunit protein L10; homologous to mammalian ribosomal protein L10 and bacterial L16; responsible for joining the 40S and 60S subunits; regulates translation initiation; similar to members of the QM gene family; protein abundance increases under DNA replication stress; mutations in human homolog implicated in T-cell acute lymphoblastic leukemia and also autism spectrum disorders (ASD); human RPL10 can complement yeast null mutant
Top 10 interactors (score): RPL22B (0.999); RPS16A (0.999); RPL31A (0.999); RPS19B (0.999); RPS15 (0.999); RPS14A (0.999); RPS11B (0.999); RPP1A (0.999); RPL6B (0.999); RPL2B (0.999); RPL36B (0.999); RPL28 (0.999); RPS28A (0.999); RPS9B (0.999); RPL26A (0.999); RPS18B (0.999); RPL23B (0.999); RPL15B (0.999); EFT1 (0.999); RPS9A (0.999)
Homologues (species, bitscore): RPL10 (Homo sapiens, 295.4); Rpl10l (Mus musculus, 299.7); rpl10 (Danio rerio, 293.1); rpl10 (Xenopus tropicalis, 295.8); RpL10 (Drosophila melanogaster, 288.9); rpl-10 (Caenorhabditis elegans, 290.8); SAG24 (Arabidopsis thaliana, 285.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:265398-266063:+ | gene-YLR075W_AKU4011 | rna-NM_001181962.1_AKU4011 | cds-NP_013176.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:228533-229198:+ | gene-YLR075W_BG1 | rna-NM_001181962.1_BG1 | cds-NP_013176.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:275307-275972:+ | gene-YLR075W_Bruggeman | rna-NM_001181962.1_Bruggeman | cds-NP_013176.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:275623-276288:+ | gene-YLR075W_CAT1 | rna-NM_001181962.1_CAT1 | cds-NP_013176.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:272512-273177:+ | gene-YLR075W_CBS1585 | rna-NM_001181962.1_CBS1585 | cds-NP_013176.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:263138-263803:+ | gene-YLR075W_CBS436 | rna-NM_001181962.1_CBS436 | cds-NP_013176.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:270954-271619:+ | gene-YLR075W_CBS6412 | rna-NM_001181962.1_CBS6412 | cds-NP_013176.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:272781-273446:+ | gene-YLR075W_CBS6413 | rna-NM_001181962.1_CBS6413 | cds-NP_013176.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:267944-268609:+ | gene-YLR075W_CENPK1137D | rna-NM_001181962.1_CENPK1137D | cds-NP_013176.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:264920-265585:+ | gene-YLR075W_EthanolRed | rna-NM_001181962.1_EthanolRed | cds-NP_013176.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:264796-265461:+ | gene-YLR075W_FaliES1 | rna-NM_001181962.1_FaliES1 | cds-NP_013176.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000129.1:39724-40389:+ | gene-YLR075W_JAY291 | rna-NM_001181962.1_JAY291 | cds-NP_013176.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:272673-273338:+ | gene-YLR075W_MUCL30387 | rna-NM_001181962.1_MUCL30387 | cds-NP_013176.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:280320-280985:+ | gene-YLR075W_MUCL30388 | rna-NM_001181962.1_MUCL30388 | cds-NP_013176.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:273030-273695:+ | gene-YLR075W_MUCL39482 | rna-NM_001181962.1_MUCL39482 | cds-NP_013176.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:272953-273618:+ | gene-YLR075W_MUCL42920 | rna-NM_001181962.1_MUCL42920 | cds-NP_013176.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:282901-283566:+ | gene-YLR075W_NCIM3186 | rna-NM_001181962.1_NCIM3186 | cds-NP_013176.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:265102-265767:+ | gene-YLR075W_NCYC1407 | rna-NM_001181962.1_NCYC1407 | cds-NP_013176.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:270966-271631:+ | gene-YLR075W_PE2H3 | rna-NM_001181962.1_PE2H3 | cds-NP_013176.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:270707-271372:+ | gene-YLR075W_PE2H4 | rna-NM_001181962.1_PE2H4 | cds-NP_013176.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:282927-283592:+ | gene-YLR075W_S288C | rna-NM_001181962.1_S288C | cds-NP_013176.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000033.1:90535-91200:- | gene-YLR075W_SA1 | rna-NM_001181962.1_SA1 | cds-NP_013176.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:264972-265637:+ | gene-YLR075W_ThermosaccDry | rna-NM_001181962.1_ThermosaccDry | cds-NP_013176.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:278657-279322:+ | gene-YLR075W_VR1 | rna-NM_001181962.1_VR1 | cds-NP_013176.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:264356-265021:+ | gene-YLR075W_ZTW1 | rna-NM_001181962.1_ZTW1 | cds-NP_013176.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:273232-273897:+ | gene-YLR075W_Sparadoxus | rna-NM_001181962.1_Sparadoxus | cds-NP_013176.1_Sparadoxus | 97.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |