Gene name: RPI1
Reference locus (S288C): YIL119C
Gene biotype: protein_coding
Description: Negative RAS protein regulator protein; Transcription factor, allelic differences between S288C and Sigma1278b; mediates fermentation stress tolerance by modulating cell wall integrity; overexpression suppresses heat shock sensitivity of wild-type RAS2 overexpression and also suppresses cell lysis defect of mpk1 mutation; allele from S288c can confer fMAPK pathway independent transcription of FLO11; S288C and Sigma1278b alleles differ in number of tandem repeats within ORF
Top 10 interactors (score): WSC4 (0.702); RGD2 (0.691); FLO11 (0.617); YLR012C (0.593); RAS2 (0.589); YLR042C (0.569); IRA1 (0.533); SNO2 (0.499); YDL218W (0.483); SNZ3 (0.454); FMP45 (0.453); FLO1 (0.451); YAF9 (0.416); MAK31 (0.416); MIT1 (0.4)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:137806-139041:- | gene-YIL119C_AKU4011 | rna-NM_001179467.3_AKU4011 | cds-NP_012147.3_AKU4011 | 97.5 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:711-1952:- | gene-YIL119C_BG1 | rna-NM_001179467.3_BG1 | cds-NP_012147.3_BG1 | 98.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:141342-142577:- | gene-YIL119C_Bruggeman | rna-NM_001179467.3_Bruggeman | cds-NP_012147.3_Bruggeman | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:134490-135707:- | gene-YIL119C_CAT1 | rna-NM_001179467.3_CAT1 | cds-NP_012147.3_CAT1 | 96.8 | 98.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:138037-139278:- | gene-YIL119C_CBS1585 | rna-NM_001179467.3_CBS1585 | cds-NP_012147.3_CBS1585 | 97.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:129225-130460:- | gene-YIL119C_CBS436 | rna-NM_001179467.3_CBS436 | cds-NP_012147.3_CBS436 | 95.2 | 98.5 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:135516-136757:- | gene-YIL119C_CBS6412 | rna-NM_001179467.3_CBS6412 | cds-NP_012147.3_CBS6412 | 98.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:129283-130500:- | gene-YIL119C_CBS6413 | rna-NM_001179467.3_CBS6413 | cds-NP_012147.3_CBS6413 | 96.1 | 98.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:128350-129573:- | gene-YIL119C_CENPK1137D | rna-NM_001179467.3_CENPK1137D | cds-NP_012147.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:123135-124370:- | gene-YIL119C_EthanolRed | rna-NM_001179467.3_EthanolRed | cds-NP_012147.3_EthanolRed | 97.5 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:139186-140421:- | gene-YIL119C_FaliES1 | rna-NM_001179467.3_FaliES1 | cds-NP_012147.3_FaliES1 | 97.5 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000383.1:9076-10317:+ | gene-YIL119C_JAY291 | rna-NM_001179467.3_JAY291 | cds-NP_012147.3_JAY291 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:138454-139671:- | gene-YIL119C_MUCL30387 | rna-NM_001179467.3_MUCL30387 | cds-NP_012147.3_MUCL30387 | 96.7 | 98.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:138036-139253:- | gene-YIL119C_MUCL30388 | rna-NM_001179467.3_MUCL30388 | cds-NP_012147.3_MUCL30388 | 96.7 | 98.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:138980-140221:- | gene-YIL119C_MUCL39482 | rna-NM_001179467.3_MUCL39482 | cds-NP_012147.3_MUCL39482 | 97.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:142220-143455:- | gene-YIL119C_MUCL42920 | rna-NM_001179467.3_MUCL42920 | cds-NP_012147.3_MUCL42920 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:136654-137877:- | gene-YIL119C_NCIM3186 | rna-NM_001179467.3_NCIM3186 | cds-NP_012147.3_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:142792-144027:- | gene-YIL119C_NCYC1407 | rna-NM_001179467.3_NCYC1407 | cds-NP_012147.3_NCYC1407 | 97.3 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:137525-138766:- | gene-YIL119C_PE2H3 | rna-NM_001179467.3_PE2H3 | cds-NP_012147.3_PE2H3 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:131678-132895:- | gene-YIL119C_PE2H4 | rna-NM_001179467.3_PE2H4 | cds-NP_012147.3_PE2H4 | 96.8 | 98.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:136654-137877:- | gene-YIL119C_S288C | rna-NM_001179467.3_S288C | cds-NP_012147.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000058.1:45554-46795:+ | gene-YIL119C_SA1 | rna-NM_001179467.3_SA1 | cds-NP_012147.3_SA1 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:137843-139078:- | gene-YIL119C_ThermosaccDry | rna-NM_001179467.3_ThermosaccDry | cds-NP_012147.3_ThermosaccDry | 97.5 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:134834-136075:- | gene-YIL119C_VR1 | rna-NM_001179467.3_VR1 | cds-NP_012147.3_VR1 | 98.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:112729-113964:- | gene-YIL119C_ZTW1 | rna-NM_001179467.3_ZTW1 | cds-NP_012147.3_ZTW1 | 97.5 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:130558-131797:- | gene-YIL119C_Sparadoxus | rna-NM_001179467.3_Sparadoxus | cds-NP_012147.3_Sparadoxus | 88.7 | 99.2 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |