Gene name: RPC82
Reference locus (S288C): YPR190C
Gene biotype: protein_coding
Description: Dna-directed rna polymerase iii subunit rpc3; RNA polymerase III subunit C82
Top 10 interactors (score): RET1 (0.999); RPO31 (0.999); RPC17 (0.999); RPC53 (0.999); RPO26 (0.999); RPB8 (0.999); RPC37 (0.999); RPC31 (0.999); RPC40 (0.999); RPB5 (0.999); RPC25 (0.999); RPC34 (0.999); RPC19 (0.999); RPB10 (0.998); RPC11 (0.998); RPC10 (0.997); RPA135 (0.995); BDP1 (0.985); BRF1 (0.982); DRS1 (0.982)
Homologues (species, bitscore): POLR3C (Homo sapiens, 63.5); Polr3c (Mus musculus, 62.4); polr3c (Danio rerio, 58.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:871361-873325:- | gene-YPR190C_AKU4011 | rna-NM_001184287.1_AKU4011 | cds-NP_015516.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:24396-26360:+ | gene-YPR190C_BG1 | rna-NM_001184287.1_BG1 | cds-NP_015516.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:952632-954596:- | gene-YPR190C_Bruggeman | rna-NM_001184287.1_Bruggeman | cds-NP_015516.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:994692-996656:- | gene-YPR190C_CAT1 | rna-NM_001184287.1_CAT1 | cds-NP_015516.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:876162-878126:- | gene-YPR190C_CBS1585 | rna-NM_001184287.1_CBS1585 | cds-NP_015516.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:889700-891664:- | gene-YPR190C_CBS436 | rna-NM_001184287.1_CBS436 | cds-NP_015516.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:877941-879905:- | gene-YPR190C_CBS6412 | rna-NM_001184287.1_CBS6412 | cds-NP_015516.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:873086-875050:- | gene-YPR190C_CBS6413 | rna-NM_001184287.1_CBS6413 | cds-NP_015516.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:917148-919112:- | gene-YPR190C_CENPK1137D | rna-NM_001184287.1_CENPK1137D | cds-NP_015516.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:1193110-1195074:- | gene-YPR190C_EthanolRed | rna-NM_001184287.1_EthanolRed | cds-NP_015516.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:873183-875147:- | gene-YPR190C_FaliES1 | rna-NM_001184287.1_FaliES1 | cds-NP_015516.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000081.1:60479-62443:- | gene-YPR190C_JAY291 | rna-NM_001184287.1_JAY291 | cds-NP_015516.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:920087-922051:- | gene-YPR190C_MUCL30387 | rna-NM_001184287.1_MUCL30387 | cds-NP_015516.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:893994-895958:- | gene-YPR190C_MUCL30388 | rna-NM_001184287.1_MUCL30388 | cds-NP_015516.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:868363-870327:- | gene-YPR190C_MUCL39482 | rna-NM_001184287.1_MUCL39482 | cds-NP_015516.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:933069-935033:- | gene-YPR190C_MUCL42920 | rna-NM_001184287.1_MUCL42920 | cds-NP_015516.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:917060-919024:- | gene-YPR190C_NCIM3186 | rna-NM_001184287.1_NCIM3186 | cds-NP_015516.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:876724-878688:- | gene-YPR190C_NCYC1407 | rna-NM_001184287.1_NCYC1407 | cds-NP_015516.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:889007-890971:- | gene-YPR190C_PE2H3 | rna-NM_001184287.1_PE2H3 | cds-NP_015516.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:888655-890619:- | gene-YPR190C_PE2H4 | rna-NM_001184287.1_PE2H4 | cds-NP_015516.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:917077-919041:- | gene-YPR190C_S288C | rna-NM_001184287.1_S288C | cds-NP_015516.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000060.1:6770-8734:+ | gene-YPR190C_SA1 | rna-NM_001184287.1_SA1 | cds-NP_015516.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:872871-874835:- | gene-YPR190C_ThermosaccDry | rna-NM_001184287.1_ThermosaccDry | cds-NP_015516.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:900660-902624:- | gene-YPR190C_VR1 | rna-NM_001184287.1_VR1 | cds-NP_015516.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:875416-877380:- | gene-YPR190C_ZTW1 | rna-NM_001184287.1_ZTW1 | cds-NP_015516.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:877469-879433:- | gene-YPR190C_Sparadoxus | rna-NM_001184287.1_Sparadoxus | cds-NP_015516.1_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |