Gene name: RPC37
Reference locus (S288C): YKR025W
Gene biotype: protein_coding
Description: Dna-directed rna polymerase iii subunit rpc5; RNA polymerase III subunit C37
Top 10 interactors (score): RPB5 (0.999); RPC40 (0.999); RPC82 (0.999); RPC34 (0.999); RPC25 (0.999); RPC11 (0.999); RPO31 (0.999); RPC17 (0.999); RPC53 (0.999); RET1 (0.999); RPC19 (0.998); RPC31 (0.998); RPO26 (0.997); RPB10 (0.997); RPB8 (0.997); RPC10 (0.996); BDP1 (0.991); BRF1 (0.978); SPT15 (0.939); RPA135 (0.927)
Homologues (species, bitscore): POLR3E (Homo sapiens, 52.8); Polr3e (Mus musculus, 53.5); polr3e (Danio rerio, 56.2); polr3e (Xenopus tropicalis, 53.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:473441-474289:+ | gene-YKR025W_AKU4011 | rna-NM_001179815.3_AKU4011 | cds-NP_012950.3_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:169197-170045:- | gene-YKR025W_BG1 | rna-NM_001179815.3_BG1 | cds-NP_012950.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:495111-495959:+ | gene-YKR025W_Bruggeman | rna-NM_001179815.3_Bruggeman | cds-NP_012950.3_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:490854-491702:+ | gene-YKR025W_CAT1 | rna-NM_001179815.3_CAT1 | cds-NP_012950.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:486181-487029:+ | gene-YKR025W_CBS1585 | rna-NM_001179815.3_CBS1585 | cds-NP_012950.3_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:485010-485858:+ | gene-YKR025W_CBS436 | rna-NM_001179815.3_CBS436 | cds-NP_012950.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:470342-471190:+ | gene-YKR025W_CBS6412 | rna-NM_001179815.3_CBS6412 | cds-NP_012950.3_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:486009-486857:+ | gene-YKR025W_CBS6413 | rna-NM_001179815.3_CBS6413 | cds-NP_012950.3_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:487512-488360:+ | gene-YKR025W_CENPK1137D | rna-NM_001179815.3_CENPK1137D | cds-NP_012950.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:483910-484758:+ | gene-YKR025W_EthanolRed | rna-NM_001179815.3_EthanolRed | cds-NP_012950.3_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:486840-487688:+ | gene-YKR025W_FaliES1 | rna-NM_001179815.3_FaliES1 | cds-NP_012950.3_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000077.1:66070-66918:- | gene-YKR025W_JAY291 | rna-NM_001179815.3_JAY291 | cds-NP_012950.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:494427-495275:+ | gene-YKR025W_MUCL30387 | rna-NM_001179815.3_MUCL30387 | cds-NP_012950.3_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:490120-490968:+ | gene-YKR025W_MUCL30388 | rna-NM_001179815.3_MUCL30388 | cds-NP_012950.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:485498-486346:+ | gene-YKR025W_MUCL39482 | rna-NM_001179815.3_MUCL39482 | cds-NP_012950.3_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:491270-492118:+ | gene-YKR025W_MUCL42920 | rna-NM_001179815.3_MUCL42920 | cds-NP_012950.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:487759-488607:+ | gene-YKR025W_NCIM3186 | rna-NM_001179815.3_NCIM3186 | cds-NP_012950.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:485705-486553:+ | gene-YKR025W_NCYC1407 | rna-NM_001179815.3_NCYC1407 | cds-NP_012950.3_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:510692-511540:+ | gene-YKR025W_PE2H3 | rna-NM_001179815.3_PE2H3 | cds-NP_012950.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:495415-496263:+ | gene-YKR025W_PE2H4 | rna-NM_001179815.3_PE2H4 | cds-NP_012950.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:487770-488618:+ | gene-YKR025W_S288C | rna-NM_001179815.3_S288C | cds-NP_012950.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000078.1:25131-25979:- | gene-YKR025W_SA1 | rna-NM_001179815.3_SA1 | cds-NP_012950.3_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:486094-486942:+ | gene-YKR025W_ThermosaccDry | rna-NM_001179815.3_ThermosaccDry | cds-NP_012950.3_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:485712-486560:+ | gene-YKR025W_VR1 | rna-NM_001179815.3_VR1 | cds-NP_012950.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:484141-484989:+ | gene-YKR025W_ZTW1 | rna-NM_001179815.3_ZTW1 | cds-NP_012950.3_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:509572-510420:+ | gene-YKR025W_Sparadoxus | rna-NM_001179815.3_Sparadoxus | cds-NP_012950.3_Sparadoxus | 89.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |