Gene name: RPC31
Reference locus (S288C): YNL151C
Gene biotype: protein_coding
Description: RNA polymerase III subunit C31; Belongs to the eukaryotic RPC7 RNA polymerase subunit family
Top 10 interactors (score): RET1 (0.999); RPC34 (0.999); RPC53 (0.999); RPC82 (0.999); RPC40 (0.999); RPO31 (0.999); RPB5 (0.999); RPC17 (0.998); RPC37 (0.998); RPC25 (0.997); RPC19 (0.997); RPC11 (0.995); RPO26 (0.994); RPB8 (0.993); RPB10 (0.991); RPC10 (0.986); BRF1 (0.98); SPT15 (0.966); UTP23 (0.964); MAK16 (0.959)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:341483-342238:- | gene-YNL151C_AKU4011 | rna-NM_001182989.3_AKU4011 | cds-NP_014248.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:245507-246262:- | gene-YNL151C_BG1 | rna-NM_001182989.3_BG1 | cds-NP_014248.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:351549-352304:- | gene-YNL151C_Bruggeman | rna-NM_001182989.3_Bruggeman | cds-NP_014248.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:394471-395226:- | gene-YNL151C_CAT1 | rna-NM_001182989.3_CAT1 | cds-NP_014248.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:342133-342888:- | gene-YNL151C_CBS1585 | rna-NM_001182989.3_CBS1585 | cds-NP_014248.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:410487-411242:- | gene-YNL151C_CBS436 | rna-NM_001182989.3_CBS436 | cds-NP_014248.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:337539-338294:- | gene-YNL151C_CBS6412 | rna-NM_001182989.3_CBS6412 | cds-NP_014248.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:338567-339322:- | gene-YNL151C_CBS6413 | rna-NM_001182989.3_CBS6413 | cds-NP_014248.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:341612-342367:- | gene-YNL151C_CENPK1137D | rna-NM_001182989.3_CENPK1137D | cds-NP_014248.3_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:338468-339223:- | gene-YNL151C_EthanolRed | rna-NM_001182989.3_EthanolRed | cds-NP_014248.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:334381-335136:- | gene-YNL151C_FaliES1 | rna-NM_001182989.3_FaliES1 | cds-NP_014248.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000439.1:8519-9274:+ | gene-YNL151C_JAY291 | rna-NM_001182989.3_JAY291 | cds-NP_014248.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:347369-348124:- | gene-YNL151C_MUCL30387 | rna-NM_001182989.3_MUCL30387 | cds-NP_014248.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:381921-382676:- | gene-YNL151C_MUCL30388 | rna-NM_001182989.3_MUCL30388 | cds-NP_014248.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:339373-340128:- | gene-YNL151C_MUCL39482 | rna-NM_001182989.3_MUCL39482 | cds-NP_014248.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:341773-342528:- | gene-YNL151C_MUCL42920 | rna-NM_001182989.3_MUCL42920 | cds-NP_014248.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:347735-348490:- | gene-YNL151C_NCIM3186 | rna-NM_001182989.3_NCIM3186 | cds-NP_014248.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:341467-342222:- | gene-YNL151C_NCYC1407 | rna-NM_001182989.3_NCYC1407 | cds-NP_014248.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:338461-339216:- | gene-YNL151C_PE2H3 | rna-NM_001182989.3_PE2H3 | cds-NP_014248.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:337849-338604:- | gene-YNL151C_PE2H4 | rna-NM_001182989.3_PE2H4 | cds-NP_014248.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:347766-348521:- | gene-YNL151C_S288C | rna-NM_001182989.3_S288C | cds-NP_014248.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:65026-65781:+ | gene-YNL151C_SA1 | rna-NM_001182989.3_SA1 | cds-NP_014248.3_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:335238-335993:- | gene-YNL151C_ThermosaccDry | rna-NM_001182989.3_ThermosaccDry | cds-NP_014248.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:353787-354542:- | gene-YNL151C_VR1 | rna-NM_001182989.3_VR1 | cds-NP_014248.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:245057-245813:- | gene-YNL151C_ZTW1 | rna-NM_001182989.3_ZTW1 | cds-NP_014248.3_ZTW1 | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:345934-346689:- | gene-YNL151C_Sparadoxus | rna-NM_001182989.3_Sparadoxus | cds-NP_014248.3_Sparadoxus | 89.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |