Gene name: RPC19
Reference locus (S288C): YNL113W
Gene biotype: protein_coding
Description: Dna-directed rna polymerases i and iii subunit rpac2; RNA polymerase subunit AC19; common to RNA polymerases I and III
Top 10 interactors (score): RPB5 (0.999); RPC40 (0.999); RPC82 (0.999); RPC34 (0.999); RPA12 (0.999); RPO31 (0.999); RPA49 (0.999); RPC53 (0.999); RPA135 (0.999); RPB8 (0.999); RPC10 (0.999); RPC25 (0.999); RPB10 (0.999); RPC11 (0.999); RPA34 (0.999); RPA43 (0.999); RPC17 (0.999); RPA190 (0.999); RPO26 (0.999); RET1 (0.999)
Homologues (species, bitscore): POLR1D (Homo sapiens, 113.2); Polr1d (Mus musculus, 112.1); polr1d (Danio rerio, 94.0); polr2j (Xenopus tropicalis, 64.7); l(2)37Cg (Drosophila melanogaster, 82.4); rpac-19 (Caenorhabditis elegans, 75.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:406455-406883:+ | gene-YNL113W_AKU4011 | rna-NM_001182951.1_AKU4011 | cds-NP_014286.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:310445-310873:+ | gene-YNL113W_BG1 | rna-NM_001182951.1_BG1 | cds-NP_014286.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:417168-417596:+ | gene-YNL113W_Bruggeman | rna-NM_001182951.1_Bruggeman | cds-NP_014286.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:460219-460647:+ | gene-YNL113W_CAT1 | rna-NM_001182951.1_CAT1 | cds-NP_014286.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:407075-407503:+ | gene-YNL113W_CBS1585 | rna-NM_001182951.1_CBS1585 | cds-NP_014286.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:475485-475913:+ | gene-YNL113W_CBS436 | rna-NM_001182951.1_CBS436 | cds-NP_014286.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:402528-402956:+ | gene-YNL113W_CBS6412 | rna-NM_001182951.1_CBS6412 | cds-NP_014286.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:403493-403921:+ | gene-YNL113W_CBS6413 | rna-NM_001182951.1_CBS6413 | cds-NP_014286.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:406619-407047:+ | gene-YNL113W_CENPK1137D | rna-NM_001182951.1_CENPK1137D | cds-NP_014286.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:403444-403872:+ | gene-YNL113W_EthanolRed | rna-NM_001182951.1_EthanolRed | cds-NP_014286.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:399346-399774:+ | gene-YNL113W_FaliES1 | rna-NM_001182951.1_FaliES1 | cds-NP_014286.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000021.1:55722-56150:+ | gene-YNL113W_JAY291 | rna-NM_001182951.1_JAY291 | cds-NP_014286.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:413336-413764:+ | gene-YNL113W_MUCL30387 | rna-NM_001182951.1_MUCL30387 | cds-NP_014286.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:448516-448944:+ | gene-YNL113W_MUCL30388 | rna-NM_001182951.1_MUCL30388 | cds-NP_014286.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:404354-404782:+ | gene-YNL113W_MUCL39482 | rna-NM_001182951.1_MUCL39482 | cds-NP_014286.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:408482-408910:+ | gene-YNL113W_MUCL42920 | rna-NM_001182951.1_MUCL42920 | cds-NP_014286.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:412740-413168:+ | gene-YNL113W_NCIM3186 | rna-NM_001182951.1_NCIM3186 | cds-NP_014286.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:406483-406911:+ | gene-YNL113W_NCYC1407 | rna-NM_001182951.1_NCYC1407 | cds-NP_014286.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:405471-405899:+ | gene-YNL113W_PE2H3 | rna-NM_001182951.1_PE2H3 | cds-NP_014286.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:404877-405305:+ | gene-YNL113W_PE2H4 | rna-NM_001182951.1_PE2H4 | cds-NP_014286.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:412771-413199:+ | gene-YNL113W_S288C | rna-NM_001182951.1_S288C | cds-NP_014286.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:333-761:- | gene-YNL113W_SA1 | rna-NM_001182951.1_SA1 | cds-NP_014286.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:400200-400628:+ | gene-YNL113W_ThermosaccDry | rna-NM_001182951.1_ThermosaccDry | cds-NP_014286.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:418860-419288:+ | gene-YNL113W_VR1 | rna-NM_001182951.1_VR1 | cds-NP_014286.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:310031-310459:+ | gene-YNL113W_ZTW1 | rna-NM_001182951.1_ZTW1 | cds-NP_014286.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:411103-411525:+ | gene-YNL113W_Sparadoxus | rna-NM_001182951.1_Sparadoxus | cds-NP_014286.1_Sparadoxus | 91.6 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |