Gene name: RPB10
Reference locus (S288C): YOR210W
Gene biotype: protein_coding
Description: Dna-directed rna polymerases i, ii, and iii subunit rpabc5; RNA polymerase subunit ABC10-beta; common to RNA polymerases I, II, and III
Top 10 interactors (score): RPC19 (0.999); RPB7 (0.999); RPA12 (0.999); RPB11 (0.999); RPO31 (0.999); RPB9 (0.999); DST1 (0.999); RPO21 (0.999); RPC25 (0.999); RPC10 (0.999); RPB8 (0.999); RPA190 (0.999); RET1 (0.999); RPO26 (0.999); RPB3 (0.999); RPC11 (0.999); RTR1 (0.999); ELF1 (0.999); RPC17 (0.999); RPA43 (0.999)
Homologues (species, bitscore): POLR2L (Homo sapiens, 106.3); Polr2l (Mus musculus, 106.3); polr2l (Danio rerio, 106.7); polr2l.2 (Xenopus tropicalis, 107.1); Rpb10 (Drosophila melanogaster, 105.5); rpb-10 (Caenorhabditis elegans, 105.5); AT1G61700 (Arabidopsis thaliana, 104.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:729103-729315:+ | gene-YOR210W_AKU4011 | rna-NM_001183629.3_AKU4011 | cds-NP_014853.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:131140-131352:+ | gene-YOR210W_BG1 | rna-NM_001183629.3_BG1 | cds-NP_014853.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:713937-714149:+ | gene-YOR210W_Bruggeman | rna-NM_001183629.3_Bruggeman | cds-NP_014853.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:715215-715427:+ | gene-YOR210W_CAT1 | rna-NM_001183629.3_CAT1 | cds-NP_014853.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:712091-712303:+ | gene-YOR210W_CBS1585 | rna-NM_001183629.3_CBS1585 | cds-NP_014853.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:710780-710992:+ | gene-YOR210W_CBS436 | rna-NM_001183629.3_CBS436 | cds-NP_014853.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:709209-709421:+ | gene-YOR210W_CBS6412 | rna-NM_001183629.3_CBS6412 | cds-NP_014853.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:717848-718060:+ | gene-YOR210W_CBS6413 | rna-NM_001183629.3_CBS6413 | cds-NP_014853.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:738081-738293:+ | gene-YOR210W_CENPK1137D | rna-NM_001183629.3_CENPK1137D | cds-NP_014853.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:705244-705456:+ | gene-YOR210W_EthanolRed | rna-NM_001183629.3_EthanolRed | cds-NP_014853.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:710641-710853:+ | gene-YOR210W_FaliES1 | rna-NM_001183629.3_FaliES1 | cds-NP_014853.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:115908-116120:- | gene-YOR210W_JAY291 | rna-NM_001183629.3_JAY291 | cds-NP_014853.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:717899-718111:+ | gene-YOR210W_MUCL30387 | rna-NM_001183629.3_MUCL30387 | cds-NP_014853.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:725318-725530:+ | gene-YOR210W_MUCL30388 | rna-NM_001183629.3_MUCL30388 | cds-NP_014853.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:719420-719632:+ | gene-YOR210W_MUCL39482 | rna-NM_001183629.3_MUCL39482 | cds-NP_014853.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:729002-729214:+ | gene-YOR210W_MUCL42920 | rna-NM_001183629.3_MUCL42920 | cds-NP_014853.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:738209-738421:+ | gene-YOR210W_NCIM3186 | rna-NM_001183629.3_NCIM3186 | cds-NP_014853.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:719518-719730:+ | gene-YOR210W_NCYC1407 | rna-NM_001183629.3_NCYC1407 | cds-NP_014853.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:718913-719125:+ | gene-YOR210W_PE2H3 | rna-NM_001183629.3_PE2H3 | cds-NP_014853.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:729290-729502:+ | gene-YOR210W_PE2H4 | rna-NM_001183629.3_PE2H4 | cds-NP_014853.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:738320-738532:+ | gene-YOR210W_S288C | rna-NM_001183629.3_S288C | cds-NP_014853.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:148320-148532:+ | gene-YOR210W_SA1 | rna-NM_001183629.3_SA1 | cds-NP_014853.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:709826-710038:+ | gene-YOR210W_ThermosaccDry | rna-NM_001183629.3_ThermosaccDry | cds-NP_014853.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:773354-773566:+ | gene-YOR210W_VR1 | rna-NM_001183629.3_VR1 | cds-NP_014853.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:442724-442936:+ | gene-YOR210W_ZTW1 | rna-NM_001183629.3_ZTW1 | cds-NP_014853.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:715669-715881:+ | gene-YOR210W_Sparadoxus | rna-NM_001183629.3_Sparadoxus | cds-NP_014853.3_Sparadoxus | 94.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |