Gene name: ROY1
Reference locus (S288C): YMR258C
Gene biotype: protein_coding
Description: GTPase inhibitor with similarity to F-box proteins; inhibits Ypt52p GTPase activity by preventing Ypt52p from binding GTP; involved in regulating intracellular trafficking; physically interacts with Skp1p
Top 10 interactors (score): YPT52 (0.974); SKP1 (0.966); GDI1 (0.842); SAF1 (0.76); YPT53 (0.746); YDR306C (0.746); YLR352W (0.716); RCY1 (0.716); HRT3 (0.713); YIL001W (0.713); VPS21 (0.71); UCC1 (0.697); TCD2 (0.671); MSB3 (0.6); COS111 (0.592); YMR1 (0.546); GDH1 (0.539); ELA1 (0.526); MUK1 (0.522); UFO1 (0.499)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:822059-823720:- | gene-YMR258C_AKU4011 | rna-NM_001182765.1_AKU4011 | cds-NP_013985.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:130682-132343:+ | gene-YMR258C_BG1 | rna-NM_001182765.1_BG1 | cds-NP_013985.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:767286-768947:- | gene-YMR258C_Bruggeman | rna-NM_001182765.1_Bruggeman | cds-NP_013985.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:770310-771971:- | gene-YMR258C_CAT1 | rna-NM_001182765.1_CAT1 | cds-NP_013985.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:754308-755969:- | gene-YMR258C_CBS1585 | rna-NM_001182765.1_CBS1585 | cds-NP_013985.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:759331-760992:- | gene-YMR258C_CBS436 | rna-NM_001182765.1_CBS436 | cds-NP_013985.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:865872-867533:- | gene-YMR258C_CBS6412 | rna-NM_001182765.1_CBS6412 | cds-NP_013985.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:753419-755080:- | gene-YMR258C_CBS6413 | rna-NM_001182765.1_CBS6413 | cds-NP_013985.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:776987-778648:- | gene-YMR258C_CENPK1137D | rna-NM_001182765.1_CENPK1137D | cds-NP_013985.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:814762-816423:- | gene-YMR258C_EthanolRed | rna-NM_001182765.1_EthanolRed | cds-NP_013985.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:760789-762450:- | gene-YMR258C_FaliES1 | rna-NM_001182765.1_FaliES1 | cds-NP_013985.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000141.1:24080-25741:+ | gene-YMR258C_JAY291 | rna-NM_001182765.1_JAY291 | cds-NP_013985.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:761135-762796:- | gene-YMR258C_MUCL30387 | rna-NM_001182765.1_MUCL30387 | cds-NP_013985.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:769728-771389:- | gene-YMR258C_MUCL30388 | rna-NM_001182765.1_MUCL30388 | cds-NP_013985.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:755396-757057:- | gene-YMR258C_MUCL39482 | rna-NM_001182765.1_MUCL39482 | cds-NP_013985.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:763464-765125:- | gene-YMR258C_MUCL42920 | rna-NM_001182765.1_MUCL42920 | cds-NP_013985.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:782574-784235:- | gene-YMR258C_NCIM3186 | rna-NM_001182765.1_NCIM3186 | cds-NP_013985.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:755029-756690:- | gene-YMR258C_NCYC1407 | rna-NM_001182765.1_NCYC1407 | cds-NP_013985.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:765030-766691:- | gene-YMR258C_PE2H3 | rna-NM_001182765.1_PE2H3 | cds-NP_013985.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:766076-767737:- | gene-YMR258C_PE2H4 | rna-NM_001182765.1_PE2H4 | cds-NP_013985.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:782620-784281:- | gene-YMR258C_S288C | rna-NM_001182765.1_S288C | cds-NP_013985.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:24154-25815:+ | gene-YMR258C_SA1 | rna-NM_001182765.1_SA1 | cds-NP_013985.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:756958-758619:- | gene-YMR258C_ThermosaccDry | rna-NM_001182765.1_ThermosaccDry | cds-NP_013985.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:769563-771224:- | gene-YMR258C_VR1 | rna-NM_001182765.1_VR1 | cds-NP_013985.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:172152-173813:- | gene-YMR258C_ZTW1 | rna-NM_001182765.1_ZTW1 | cds-NP_013985.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:775342-777003:- | gene-YMR258C_Sparadoxus | rna-NM_001182765.1_Sparadoxus | cds-NP_013985.1_Sparadoxus | 90.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |