Gene name: ROQ1
Reference locus (S288C): YJL144W
Gene biotype: protein_coding
Description: Uncharacterized protein YJL144W; Cytoplasmic hydrophilin essential in desiccation-rehydration process; expression induced by osmotic stress, starvation and during stationary phase; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): HSP42 (0.972); OPI10 (0.951); BTN2 (0.925); HSP78 (0.92); HSP104 (0.868); STF2 (0.814); SIP18 (0.783); GRE1 (0.764); YNL190W (0.763); EDC2 (0.732); APJ1 (0.728); YBR016W (0.714); NOP6 (0.711); SPI1 (0.669); SSA4 (0.665); RNY1 (0.664); CUR1 (0.631); TMA10 (0.624); SSE2 (0.618); IRC9 (0.608)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:134654-134968:+ | gene-YJL144W_AKU4011 | rna-NM_001181577.1_AKU4011 | cds-NP_012391.1_AKU4011 | 97.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:478751-479065:- | gene-YJL144W_BG1 | rna-NM_001181577.1_BG1 | cds-NP_012391.1_BG1 | 97.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:146489-146803:+ | gene-YJL144W_Bruggeman | rna-NM_001181577.1_Bruggeman | cds-NP_012391.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:150277-150591:+ | gene-YJL144W_CAT1 | rna-NM_001181577.1_CAT1 | cds-NP_012391.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:140288-140602:+ | gene-YJL144W_CBS1585 | rna-NM_001181577.1_CBS1585 | cds-NP_012391.1_CBS1585 | 97.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:165039-165353:+ | gene-YJL144W_CBS436 | rna-NM_001181577.1_CBS436 | cds-NP_012391.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:136697-137011:+ | gene-YJL144W_CBS6412 | rna-NM_001181577.1_CBS6412 | cds-NP_012391.1_CBS6412 | 96.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:137761-138075:+ | gene-YJL144W_CBS6413 | rna-NM_001181577.1_CBS6413 | cds-NP_012391.1_CBS6413 | 97.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:128748-129062:+ | gene-YJL144W_CENPK1137D | rna-NM_001181577.1_CENPK1137D | cds-NP_012391.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:138812-139126:+ | gene-YJL144W_EthanolRed | rna-NM_001181577.1_EthanolRed | cds-NP_012391.1_EthanolRed | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:144290-144604:+ | gene-YJL144W_FaliES1 | rna-NM_001181577.1_FaliES1 | cds-NP_012391.1_FaliES1 | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000099.1:25470-25784:+ | gene-YJL144W_JAY291 | rna-NM_001181577.1_JAY291 | cds-NP_012391.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:148758-149072:+ | gene-YJL144W_MUCL30387 | rna-NM_001181577.1_MUCL30387 | cds-NP_012391.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:144810-145124:+ | gene-YJL144W_MUCL30388 | rna-NM_001181577.1_MUCL30388 | cds-NP_012391.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:139030-139344:+ | gene-YJL144W_MUCL39482 | rna-NM_001181577.1_MUCL39482 | cds-NP_012391.1_MUCL39482 | 97.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:144549-144863:+ | gene-YJL144W_MUCL42920 | rna-NM_001181577.1_MUCL42920 | cds-NP_012391.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:146338-146652:+ | gene-YJL144W_NCIM3186 | rna-NM_001181577.1_NCIM3186 | cds-NP_012391.1_NCIM3186 | 97.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:137639-137953:+ | gene-YJL144W_NCYC1407 | rna-NM_001181577.1_NCYC1407 | cds-NP_012391.1_NCYC1407 | 96.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:150448-150762:+ | gene-YJL144W_PE2H3 | rna-NM_001181577.1_PE2H3 | cds-NP_012391.1_PE2H3 | 97.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:150090-150404:+ | gene-YJL144W_PE2H4 | rna-NM_001181577.1_PE2H4 | cds-NP_012391.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:146359-146673:+ | gene-YJL144W_S288C | rna-NM_001181577.1_S288C | cds-NP_012391.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000022.1:6941-7255:- | gene-YJL144W_SA1 | rna-NM_001181577.1_SA1 | cds-NP_012391.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:137481-137795:+ | gene-YJL144W_ThermosaccDry | rna-NM_001181577.1_ThermosaccDry | cds-NP_012391.1_ThermosaccDry | 96.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:144565-144879:+ | gene-YJL144W_VR1 | rna-NM_001181577.1_VR1 | cds-NP_012391.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:124770-125084:+ | gene-YJL144W_ZTW1 | rna-NM_001181577.1_ZTW1 | cds-NP_012391.1_ZTW1 | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:150051-150365:+ | gene-YJL144W_Sparadoxus | rna-NM_001181577.1_Sparadoxus | cds-NP_012391.1_Sparadoxus | 87.6 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |