Gene name: ROD1
Reference locus (S288C): YOR018W
Gene biotype: protein_coding
Description: Arrestin-related trafficking adapter 4/5/7; Protein ROD1; Alpha-arrestin involved in ubiquitin-dependent endocytosis; activating dephosphorylation relays glucose signaling to transporter endocytosis; calcineurin dephosphorylation is required for Rsp5p-dependent internalization of agonist-occupied Ste2p, as part of signal desensitization; recruits Rsp5p to Ste2p via its 2 PPXY motifs; protein abundance increases in response to DNA replication stress; ROD1 has a paralog, ROG3, that arose from the whole genome duplication
Top 10 interactors (score): RSP5 (0.996); SNF1 (0.932); ALY1 (0.926); LDB19 (0.916); JEN1 (0.866); BUL1 (0.859); BUL2 (0.839); HXT6 (0.823); CSR2 (0.806); STE2 (0.794); ECM21 (0.78); ART10 (0.747); RIM8 (0.746); NPR1 (0.675); BMH2 (0.671); SNF4 (0.668); YPK1 (0.625); SPO23 (0.618); DIP5 (0.596); GLC7 (0.577)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:348576-351089:+ | gene-YOR018W_AKU4011 | rna-NM_001183437.1_AKU4011 | cds-NP_014661.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:164149-166662:+ | gene-YOR018W_BG1 | rna-NM_001183437.1_BG1 | cds-NP_014661.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:351318-353831:+ | gene-YOR018W_Bruggeman | rna-NM_001183437.1_Bruggeman | cds-NP_014661.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:349451-351964:+ | gene-YOR018W_CAT1 | rna-NM_001183437.1_CAT1 | cds-NP_014661.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:343267-345780:+ | gene-YOR018W_CBS1585 | rna-NM_001183437.1_CBS1585 | cds-NP_014661.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:347627-350140:+ | gene-YOR018W_CBS436 | rna-NM_001183437.1_CBS436 | cds-NP_014661.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:342620-345133:+ | gene-YOR018W_CBS6412 | rna-NM_001183437.1_CBS6412 | cds-NP_014661.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:349995-352508:+ | gene-YOR018W_CBS6413 | rna-NM_001183437.1_CBS6413 | cds-NP_014661.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:364248-366761:+ | gene-YOR018W_CENPK1137D | rna-NM_001183437.1_CENPK1137D | cds-NP_014661.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:345276-347789:+ | gene-YOR018W_EthanolRed | rna-NM_001183437.1_EthanolRed | cds-NP_014661.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:348625-351138:+ | gene-YOR018W_FaliES1 | rna-NM_001183437.1_FaliES1 | cds-NP_014661.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000035.1:19266-21779:+ | gene-YOR018W_JAY291 | rna-NM_001183437.1_JAY291 | cds-NP_014661.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:355709-358222:+ | gene-YOR018W_MUCL30387 | rna-NM_001183437.1_MUCL30387 | cds-NP_014661.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:359141-361654:+ | gene-YOR018W_MUCL30388 | rna-NM_001183437.1_MUCL30388 | cds-NP_014661.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:350750-353263:+ | gene-YOR018W_MUCL39482 | rna-NM_001183437.1_MUCL39482 | cds-NP_014661.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:365559-368072:+ | gene-YOR018W_MUCL42920 | rna-NM_001183437.1_MUCL42920 | cds-NP_014661.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:364258-366771:+ | gene-YOR018W_NCIM3186 | rna-NM_001183437.1_NCIM3186 | cds-NP_014661.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:357451-359964:+ | gene-YOR018W_NCYC1407 | rna-NM_001183437.1_NCYC1407 | cds-NP_014661.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:356285-358798:+ | gene-YOR018W_PE2H3 | rna-NM_001183437.1_PE2H3 | cds-NP_014661.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:366664-369177:+ | gene-YOR018W_PE2H4 | rna-NM_001183437.1_PE2H4 | cds-NP_014661.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:364369-366882:+ | gene-YOR018W_S288C | rna-NM_001183437.1_S288C | cds-NP_014661.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:332135-334648:+ | gene-YOR018W_SA1 | rna-NM_001183437.1_SA1 | cds-NP_014661.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:347164-349677:+ | gene-YOR018W_ThermosaccDry | rna-NM_001183437.1_ThermosaccDry | cds-NP_014661.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:348057-350570:+ | gene-YOR018W_VR1 | rna-NM_001183437.1_VR1 | cds-NP_014661.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:81794-84307:+ | gene-YOR018W_ZTW1 | rna-NM_001183437.1_ZTW1 | cds-NP_014661.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:354085-356600:+ | gene-YOR018W_Sparadoxus | rna-NM_001183437.1_Sparadoxus | cds-NP_014661.1_Sparadoxus | 89.9 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |