Gene name: RNR2
Reference locus (S288C): YJL026W
Gene biotype: protein_coding
Description: Ribonucleoside-diphosphate reductase small chain 1; Ribonucleotide-diphosphate reductase (RNR), small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits; RNR2 has a paralog, RNR4, that arose from the whole genome duplication; Belongs to the ribonucleoside diphosphate reductase small chain family
Top 10 interactors (score): RNR3 (0.999); RNR4 (0.999); RNR1 (0.999); WTM1 (0.986); DUN1 (0.978); ASF1 (0.968); MEC1 (0.967); CDC21 (0.958); CDC8 (0.952); MCM2 (0.949); HUG1 (0.947); MCM7 (0.943); RAD53 (0.941); RFA2 (0.941); POL30 (0.939); PRI1 (0.936); DUT1 (0.934); POL1 (0.921); MCM5 (0.92); MAD2 (0.919)
Homologues (species, bitscore): RRM2 (Homo sapiens, 473.8); Rrm2 (Mus musculus, 474.9); rrm2 (Danio rerio, 481.1); rrm2.1 (Xenopus tropicalis, 474.9); RnrS (Drosophila melanogaster, 448.7); rnr-2 (Caenorhabditis elegans, 421.8); TSO2 (Arabidopsis thaliana, 433.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:375360-376559:+ | gene-YJL026W_AKU4011 | rna-NM_001181460.1_AKU4011 | cds-NP_012508.1_AKU4011 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:237526-238725:- | gene-YJL026W_BG1 | rna-NM_001181460.1_BG1 | cds-NP_012508.1_BG1 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:389553-390752:+ | gene-YJL026W_Bruggeman | rna-NM_001181460.1_Bruggeman | cds-NP_012508.1_Bruggeman | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:393510-394709:+ | gene-YJL026W_CAT1 | rna-NM_001181460.1_CAT1 | cds-NP_012508.1_CAT1 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:387025-388224:+ | gene-YJL026W_CBS1585 | rna-NM_001181460.1_CBS1585 | cds-NP_012508.1_CBS1585 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:405381-406580:+ | gene-YJL026W_CBS436 | rna-NM_001181460.1_CBS436 | cds-NP_012508.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:375621-376820:+ | gene-YJL026W_CBS6412 | rna-NM_001181460.1_CBS6412 | cds-NP_012508.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:377502-378701:+ | gene-YJL026W_CBS6413 | rna-NM_001181460.1_CBS6413 | cds-NP_012508.1_CBS6413 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:374830-376029:+ | gene-YJL026W_CENPK1137D | rna-NM_001181460.1_CENPK1137D | cds-NP_012508.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:378577-379776:+ | gene-YJL026W_EthanolRed | rna-NM_001181460.1_EthanolRed | cds-NP_012508.1_EthanolRed | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:391024-392223:+ | gene-YJL026W_FaliES1 | rna-NM_001181460.1_FaliES1 | cds-NP_012508.1_FaliES1 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000200.1:23207-24406:- | gene-YJL026W_JAY291 | rna-NM_001181460.1_JAY291 | cds-NP_012508.1_JAY291 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:389794-390993:+ | gene-YJL026W_MUCL30387 | rna-NM_001181460.1_MUCL30387 | cds-NP_012508.1_MUCL30387 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:385938-387137:+ | gene-YJL026W_MUCL30388 | rna-NM_001181460.1_MUCL30388 | cds-NP_012508.1_MUCL30388 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:380349-381548:+ | gene-YJL026W_MUCL39482 | rna-NM_001181460.1_MUCL39482 | cds-NP_012508.1_MUCL39482 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:385681-386880:+ | gene-YJL026W_MUCL42920 | rna-NM_001181460.1_MUCL42920 | cds-NP_012508.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:392383-393582:+ | gene-YJL026W_NCIM3186 | rna-NM_001181460.1_NCIM3186 | cds-NP_012508.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:378297-379496:+ | gene-YJL026W_NCYC1407 | rna-NM_001181460.1_NCYC1407 | cds-NP_012508.1_NCYC1407 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:390371-391570:+ | gene-YJL026W_PE2H3 | rna-NM_001181460.1_PE2H3 | cds-NP_012508.1_PE2H3 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:390017-391216:+ | gene-YJL026W_PE2H4 | rna-NM_001181460.1_PE2H4 | cds-NP_012508.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:392404-393603:+ | gene-YJL026W_S288C | rna-NM_001181460.1_S288C | cds-NP_012508.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:187902-189101:+ | gene-YJL026W_SA1 | rna-NM_001181460.1_SA1 | cds-NP_012508.1_SA1 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:384685-385884:+ | gene-YJL026W_ThermosaccDry | rna-NM_001181460.1_ThermosaccDry | cds-NP_012508.1_ThermosaccDry | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:386529-387728:+ | gene-YJL026W_VR1 | rna-NM_001181460.1_VR1 | cds-NP_012508.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:365350-366549:+ | gene-YJL026W_ZTW1 | rna-NM_001181460.1_ZTW1 | cds-NP_012508.1_ZTW1 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:390598-391797:+ | gene-YJL026W_Sparadoxus | rna-NM_001181460.1_Sparadoxus | cds-NP_012508.1_Sparadoxus | 95.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |