Gene name: RNH203
Reference locus (S288C): YLR154C
Gene biotype: protein_coding
Description: Ribonuclease H2 subunit; required for RNase H2 activity; role in ribonucleotide excision repair; related to human AGS3 that causes Aicardi-Goutieres syndrome
Top 10 interactors (score): RNH202 (0.999); RNH201 (0.997); YLR152C (0.842); SGS1 (0.796); ESC2 (0.745); SRL2 (0.717); YER084W (0.715); BSC6 (0.711); RAD27 (0.7); YGR017W (0.691); MMS4 (0.69); ASP3-2 (0.671); ASP3-3 (0.671); ASP3-1 (0.639); YLR149C (0.618); ASP3-4 (0.618); RAD50 (0.59); IES5 (0.574); HAP1 (0.572); CIP1 (0.568)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:430461-430793:- | gene-YLR154C_AKU4011 | rna-NM_001182041.1_AKU4011 | cds-NP_013255.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:394232-394564:- | gene-YLR154C_BG1 | rna-NM_001182041.1_BG1 | cds-NP_013255.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:442358-442690:- | gene-YLR154C_Bruggeman | rna-NM_001182041.1_Bruggeman | cds-NP_013255.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:441742-442074:- | gene-YLR154C_CAT1 | rna-NM_001182041.1_CAT1 | cds-NP_013255.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:437604-437936:- | gene-YLR154C_CBS1585 | rna-NM_001182041.1_CBS1585 | cds-NP_013255.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:427843-428175:- | gene-YLR154C_CBS436 | rna-NM_001182041.1_CBS436 | cds-NP_013255.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:436022-436354:- | gene-YLR154C_CBS6412 | rna-NM_001182041.1_CBS6412 | cds-NP_013255.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:437869-438201:- | gene-YLR154C_CBS6413 | rna-NM_001182041.1_CBS6413 | cds-NP_013255.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:433000-433332:- | gene-YLR154C_CENPK1137D | rna-NM_001182041.1_CENPK1137D | cds-NP_013255.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:430664-430996:- | gene-YLR154C_EthanolRed | rna-NM_001182041.1_EthanolRed | cds-NP_013255.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:430173-430505:- | gene-YLR154C_FaliES1 | rna-NM_001182041.1_FaliES1 | cds-NP_013255.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000061.1:36832-37164:- | gene-YLR154C_JAY291 | rna-NM_001182041.1_JAY291 | cds-NP_013255.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:442363-442695:- | gene-YLR154C_MUCL30387 | rna-NM_001182041.1_MUCL30387 | cds-NP_013255.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:447163-447495:- | gene-YLR154C_MUCL30388 | rna-NM_001182041.1_MUCL30388 | cds-NP_013255.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:438113-438445:- | gene-YLR154C_MUCL39482 | rna-NM_001182041.1_MUCL39482 | cds-NP_013255.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:438269-438601:- | gene-YLR154C_MUCL42920 | rna-NM_001182041.1_MUCL42920 | cds-NP_013255.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:447956-448288:- | gene-YLR154C_NCIM3186 | rna-NM_001182041.1_NCIM3186 | cds-NP_013255.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:430385-430717:- | gene-YLR154C_NCYC1407 | rna-NM_001182041.1_NCYC1407 | cds-NP_013255.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:435943-436275:- | gene-YLR154C_PE2H3 | rna-NM_001182041.1_PE2H3 | cds-NP_013255.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:435684-436016:- | gene-YLR154C_PE2H4 | rna-NM_001182041.1_PE2H4 | cds-NP_013255.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:447982-448314:- | gene-YLR154C_S288C | rna-NM_001182041.1_S288C | cds-NP_013255.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000055.1:73881-74213:- | gene-YLR154C_SA1 | rna-NM_001182041.1_SA1 | cds-NP_013255.1_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:431385-431717:- | gene-YLR154C_ThermosaccDry | rna-NM_001182041.1_ThermosaccDry | cds-NP_013255.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:444081-444413:- | gene-YLR154C_VR1 | rna-NM_001182041.1_VR1 | cds-NP_013255.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:429169-429501:- | gene-YLR154C_ZTW1 | rna-NM_001182041.1_ZTW1 | cds-NP_013255.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:439385-439714:- | gene-YLR154C_Sparadoxus | rna-NM_001182041.1_Sparadoxus | cds-NP_013255.1_Sparadoxus | 85.9 | 98.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |