Gene name: RNH202
Reference locus (S288C): YDR279W
Gene biotype: protein_coding
Description: Ribonuclease H2 subunit; required for RNase H2 activity; role in ribonucleotide excision repair; related to human AGS2 that causes Aicardi-Goutieres syndrome
Top 10 interactors (score): RNH201 (0.999); RNH203 (0.999); SGS1 (0.911); RNH1 (0.826); YCR100C (0.746); SMC6 (0.718); RAD52 (0.717); ESC2 (0.713); RAD51 (0.697); RAD27 (0.689); DIA2 (0.686); POL2 (0.675); PBY1 (0.652); MMS4 (0.629); MUS81 (0.626); HPR1 (0.594); SRS2 (0.548); DNA2 (0.531); VID22 (0.521); RAD50 (0.495)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:971698-972750:+ | gene-YDR279W_AKU4011 | rna-NM_001180587.3_AKU4011 | cds-NP_010565.3_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:159150-160202:- | gene-YDR279W_BG1 | rna-NM_001180587.3_BG1 | cds-NP_010565.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:997846-998898:+ | gene-YDR279W_Bruggeman | rna-NM_001180587.3_Bruggeman | cds-NP_010565.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:985984-987036:+ | gene-YDR279W_CAT1 | rna-NM_001180587.3_CAT1 | cds-NP_010565.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:966144-967196:+ | gene-YDR279W_CBS1585 | rna-NM_001180587.3_CBS1585 | cds-NP_010565.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:984166-985218:+ | gene-YDR279W_CBS436 | rna-NM_001180587.3_CBS436 | cds-NP_010565.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:962827-963879:+ | gene-YDR279W_CBS6412 | rna-NM_001180587.3_CBS6412 | cds-NP_010565.3_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:984063-985115:+ | gene-YDR279W_CBS6413 | rna-NM_001180587.3_CBS6413 | cds-NP_010565.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1018014-1019066:+ | gene-YDR279W_CENPK1137D | rna-NM_001180587.3_CENPK1137D | cds-NP_010565.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:970243-971295:+ | gene-YDR279W_EthanolRed | rna-NM_001180587.3_EthanolRed | cds-NP_010565.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:978445-979497:+ | gene-YDR279W_FaliES1 | rna-NM_001180587.3_FaliES1 | cds-NP_010565.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000297.1:2749-3801:- | gene-YDR279W_JAY291 | rna-NM_001180587.3_JAY291 | cds-NP_010565.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:983892-984944:+ | gene-YDR279W_MUCL30387 | rna-NM_001180587.3_MUCL30387 | cds-NP_010565.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:971209-972261:+ | gene-YDR279W_MUCL30388 | rna-NM_001180587.3_MUCL30388 | cds-NP_010565.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:957950-959002:+ | gene-YDR279W_MUCL39482 | rna-NM_001180587.3_MUCL39482 | cds-NP_010565.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:897935-898987:+ | gene-YDR279W_MUCL42920 | rna-NM_001180587.3_MUCL42920 | cds-NP_010565.3_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1019291-1020343:+ | gene-YDR279W_NCIM3186 | rna-NM_001180587.3_NCIM3186 | cds-NP_010565.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:971240-972292:+ | gene-YDR279W_NCYC1407 | rna-NM_001180587.3_NCYC1407 | cds-NP_010565.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:981896-982948:+ | gene-YDR279W_PE2H3 | rna-NM_001180587.3_PE2H3 | cds-NP_010565.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:987481-988533:+ | gene-YDR279W_PE2H4 | rna-NM_001180587.3_PE2H4 | cds-NP_010565.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1019368-1020420:+ | gene-YDR279W_S288C | rna-NM_001180587.3_S288C | cds-NP_010565.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000102.1:27024-28076:+ | gene-YDR279W_SA1 | rna-NM_001180587.3_SA1 | cds-NP_010565.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:982730-983782:+ | gene-YDR279W_ThermosaccDry | rna-NM_001180587.3_ThermosaccDry | cds-NP_010565.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:998323-999375:+ | gene-YDR279W_VR1 | rna-NM_001180587.3_VR1 | cds-NP_010565.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:26853-27905:+ | gene-YDR279W_ZTW1 | rna-NM_001180587.3_ZTW1 | cds-NP_010565.3_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:978228-979280:+ | gene-YDR279W_Sparadoxus | rna-NM_001180587.3_Sparadoxus | cds-NP_010565.3_Sparadoxus | 86.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |