RNA170 (YNCM0032C)

Gene profile

Gene name: RNA170
Reference locus (S288C): YNCM0032C
Gene biotype: ncRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:707198-707366:- gene-YNCM0032C_AKU4011 rna-NR_132247.1_AKU4011 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:247217-247385:+ gene-YNCM0032C_BG1 rna-NR_132247.1_BG1 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:651424-651592:- gene-YNCM0032C_Bruggeman rna-NR_132247.1_Bruggeman Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:654678-654846:- gene-YNCM0032C_CAT1 rna-NR_132247.1_CAT1 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:639455-639623:- gene-YNCM0032C_CBS1585 rna-NR_132247.1_CBS1585 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005355.1:643722-643890:- gene-YNCM0032C_CBS436 rna-NR_132247.1_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:751012-751180:- gene-YNCM0032C_CBS6412 rna-NR_132247.1_CBS6412 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:638604-638772:- gene-YNCM0032C_CBS6413 rna-NR_132247.1_CBS6413 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:661974-662142:- gene-YNCM0032C_CENPK1137D rna-NR_132247.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:699645-699813:- gene-YNCM0032C_EthanolRed rna-NR_132247.1_EthanolRed Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:645299-645467:- gene-YNCM0032C_FaliES1 rna-NR_132247.1_FaliES1 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000141.1:140535-140703:+ gene-YNCM0032C_JAY291 rna-NR_132247.1_JAY291 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:644971-645139:- gene-YNCM0032C_MUCL30387 rna-NR_132247.1_MUCL30387 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:651747-651915:- gene-YNCM0032C_MUCL30388 rna-NR_132247.1_MUCL30388 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:640525-640693:- gene-YNCM0032C_MUCL39482 rna-NR_132247.1_MUCL39482 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:647866-648034:- gene-YNCM0032C_MUCL42920 rna-NR_132247.1_MUCL42920 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:667242-667410:- gene-YNCM0032C_NCIM3186 rna-NR_132247.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:640177-640345:- gene-YNCM0032C_NCYC1407 rna-NR_132247.1_NCYC1407 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:650037-650205:- gene-YNCM0032C_PE2H3 rna-NR_132247.1_PE2H3 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:651054-651222:- gene-YNCM0032C_PE2H4 rna-NR_132247.1_PE2H4 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:667288-667456:- gene-YNCM0032C_S288C rna-NR_132247.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:140657-140825:+ gene-YNCM0032C_SA1 rna-NR_132247.1_SA1 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:641427-641595:- gene-YNCM0032C_ThermosaccDry rna-NR_132247.1_ThermosaccDry Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:654569-654737:- gene-YNCM0032C_VR1 rna-NR_132247.1_VR1 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000028.1:57202-57370:- gene-YNCM0032C_ZTW1 rna-NR_132247.1_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:659355-659506:- gene-YNCM0032C_Sparadoxus rna-NR_132247.1_Sparadoxus Unknown 83.5 89.3 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files