Gene name: RMT2
Reference locus (S288C): YDR465C
Gene biotype: protein_coding
Description: Arginine N5 methyltransferase; methylates ribosomal protein Rpl12 (L12) on Arg67; relative distribution to the nucleus increases upon DNA replication stress
Top 10 interactors (score): HMT1 (0.994); RKM2 (0.977); BRX1 (0.973); HSL7 (0.963); RKM1 (0.961); RPA135 (0.947); ARX1 (0.943); YTM1 (0.937); TAE1 (0.937); DBP3 (0.933); PUF6 (0.932); NOP2 (0.931); NUG1 (0.929); ERB1 (0.929); PWP1 (0.928); UTP5 (0.928); SYO1 (0.927); SDA1 (0.925); NOP13 (0.924); NMD3 (0.923)
Homologues (species, bitscore): GAMT (Homo sapiens, 55.5); Gamt (Mus musculus, 54.3); gamt (Danio rerio, 55.1); gamt (Xenopus tropicalis, 58.5); AT5G65860 (Arabidopsis thaliana, 168.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1333248-1334486:- | gene-YDR465C_AKU4011 | rna-NM_001180773.1_AKU4011 | cds-NP_010753.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:208363-209601:- | gene-YDR465C_BG1 | rna-NM_001180773.1_BG1 | cds-NP_010753.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1364669-1365907:- | gene-YDR465C_Bruggeman | rna-NM_001180773.1_Bruggeman | cds-NP_010753.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1341813-1343051:- | gene-YDR465C_CAT1 | rna-NM_001180773.1_CAT1 | cds-NP_010753.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1327553-1328791:- | gene-YDR465C_CBS1585 | rna-NM_001180773.1_CBS1585 | cds-NP_010753.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1346921-1348159:- | gene-YDR465C_CBS436 | rna-NM_001180773.1_CBS436 | cds-NP_010753.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1323180-1324418:- | gene-YDR465C_CBS6412 | rna-NM_001180773.1_CBS6412 | cds-NP_010753.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1346191-1347429:- | gene-YDR465C_CBS6413 | rna-NM_001180773.1_CBS6413 | cds-NP_010753.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1392032-1393270:- | gene-YDR465C_CENPK1137D | rna-NM_001180773.1_CENPK1137D | cds-NP_010753.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1336595-1337833:- | gene-YDR465C_EthanolRed | rna-NM_001180773.1_EthanolRed | cds-NP_010753.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1340148-1341386:- | gene-YDR465C_FaliES1 | rna-NM_001180773.1_FaliES1 | cds-NP_010753.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:38405-39643:- | gene-YDR465C_JAY291 | rna-NM_001180773.1_JAY291 | cds-NP_010753.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1347161-1348399:- | gene-YDR465C_MUCL30387 | rna-NM_001180773.1_MUCL30387 | cds-NP_010753.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1329183-1330421:- | gene-YDR465C_MUCL30388 | rna-NM_001180773.1_MUCL30388 | cds-NP_010753.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1319037-1320275:- | gene-YDR465C_MUCL39482 | rna-NM_001180773.1_MUCL39482 | cds-NP_010753.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1261837-1263075:- | gene-YDR465C_MUCL42920 | rna-NM_001180773.1_MUCL42920 | cds-NP_010753.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1393259-1394497:- | gene-YDR465C_NCIM3186 | rna-NM_001180773.1_NCIM3186 | cds-NP_010753.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1332810-1334048:- | gene-YDR465C_NCYC1407 | rna-NM_001180773.1_NCYC1407 | cds-NP_010753.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1343656-1344894:- | gene-YDR465C_PE2H3 | rna-NM_001180773.1_PE2H3 | cds-NP_010753.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1349229-1350467:- | gene-YDR465C_PE2H4 | rna-NM_001180773.1_PE2H4 | cds-NP_010753.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1393336-1394574:- | gene-YDR465C_S288C | rna-NM_001180773.1_S288C | cds-NP_010753.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:222586-223824:+ | gene-YDR465C_SA1 | rna-NM_001180773.1_SA1 | cds-NP_010753.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1344370-1345608:- | gene-YDR465C_ThermosaccDry | rna-NM_001180773.1_ThermosaccDry | cds-NP_010753.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1360099-1361337:- | gene-YDR465C_VR1 | rna-NM_001180773.1_VR1 | cds-NP_010753.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:387042-388280:- | gene-YDR465C_ZTW1 | rna-NM_001180773.1_ZTW1 | cds-NP_010753.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1347442-1348680:- | gene-YDR465C_Sparadoxus | rna-NM_001180773.1_Sparadoxus | cds-NP_010753.1_Sparadoxus | 90.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |