Gene name: RMR1
Reference locus (S288C): YGL250W
Gene biotype: protein_coding
Description: Protein required for meiotic recombination and gene conversion; null mutant displays reduced PIS1 expression and growth defects on non-fermentable carbon sources and minimal media; GFP-fusion protein localizes to both cytoplasm and nucleus; Belongs to the RMR1 family
Top 10 interactors (score): TRP5 (0.647); YMR111C (0.645); AHC1 (0.619); SMT3 (0.618); IRC15 (0.611); SOH1 (0.576); MMS22 (0.522); SLX5 (0.518); SIR3 (0.514); DEF1 (0.499); HOS2 (0.485); BDF1 (0.481); IQG1 (0.465); CSM1 (0.465); EHD3 (0.465); TPS2 (0.465); ZIP1 (0.454); YIL077C (0.453); VPS70 (0.453); BRE5 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:33434-34159:+ | gene-YGL250W_AKU4011 | rna-NM_001181116.1_AKU4011 | cds-NP_011264.2_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000175.1:25474-26199:+ | gene-YGL250W_BG1 | rna-NM_001181116.1_BG1 | cds-NP_011264.2_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:33790-34515:+ | gene-YGL250W_Bruggeman | rna-NM_001181116.1_Bruggeman | cds-NP_011264.2_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:31862-32587:+ | gene-YGL250W_CAT1 | rna-NM_001181116.1_CAT1 | cds-NP_011264.2_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:37722-38447:+ | gene-YGL250W_CBS1585 | rna-NM_001181116.1_CBS1585 | cds-NP_011264.2_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:32451-33176:+ | gene-YGL250W_CBS436 | rna-NM_001181116.1_CBS436 | cds-NP_011264.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:25290-26015:+ | gene-YGL250W_CBS6412 | rna-NM_001181116.1_CBS6412 | cds-NP_011264.2_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:31578-32303:+ | gene-YGL250W_CBS6413 | rna-NM_001181116.1_CBS6413 | cds-NP_011264.2_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:31572-32297:+ | gene-YGL250W_CENPK1137D | rna-NM_001181116.1_CENPK1137D | cds-NP_011264.2_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:24711-25436:+ | gene-YGL250W_EthanolRed | rna-NM_001181116.1_EthanolRed | cds-NP_011264.2_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:25072-25797:+ | gene-YGL250W_FaliES1 | rna-NM_001181116.1_FaliES1 | cds-NP_011264.2_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000079.1:41283-42008:- | gene-YGL250W_JAY291 | rna-NM_001181116.1_JAY291 | cds-NP_011264.2_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:33726-34451:+ | gene-YGL250W_MUCL30387 | rna-NM_001181116.1_MUCL30387 | cds-NP_011264.2_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:35880-36605:+ | gene-YGL250W_MUCL30388 | rna-NM_001181116.1_MUCL30388 | cds-NP_011264.2_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:34319-35044:+ | gene-YGL250W_MUCL39482 | rna-NM_001181116.1_MUCL39482 | cds-NP_011264.2_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:37213-37938:+ | gene-YGL250W_MUCL42920 | rna-NM_001181116.1_MUCL42920 | cds-NP_011264.2_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:31910-32635:+ | gene-YGL250W_NCIM3186 | rna-NM_001181116.1_NCIM3186 | cds-NP_011264.2_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:26083-26808:+ | gene-YGL250W_NCYC1407 | rna-NM_001181116.1_NCYC1407 | cds-NP_011264.2_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:27939-28664:+ | gene-YGL250W_PE2H3 | rna-NM_001181116.1_PE2H3 | cds-NP_011264.2_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:27487-28212:+ | gene-YGL250W_PE2H4 | rna-NM_001181116.1_PE2H4 | cds-NP_011264.2_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:31910-32635:+ | gene-YGL250W_S288C | rna-NM_001181116.1_S288C | cds-NP_011264.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:342699-343424:- | gene-YGL250W_SA1 | rna-NM_001181116.1_SA1 | cds-NP_011264.2_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:25387-26112:+ | gene-YGL250W_ThermosaccDry | rna-NM_001181116.1_ThermosaccDry | cds-NP_011264.2_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:32377-33102:+ | gene-YGL250W_VR1 | rna-NM_001181116.1_VR1 | cds-NP_011264.2_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:24461-25186:+ | gene-YGL250W_ZTW1 | rna-NM_001181116.1_ZTW1 | cds-NP_011264.2_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:33126-33851:+ | gene-YGL250W_Sparadoxus | rna-NM_001181116.1_Sparadoxus | cds-NP_011264.2_Sparadoxus | 89.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |