Gene name: RMP1
Reference locus (S288C): YLR145W
Gene biotype: protein_coding
Description: Ribonuclease MRP protein subunit RMP1; Subunit of RNase MRP; RNase MRP processes pre-rRNA and has a role in cell cycle-regulated degradation of daughter cell-specific mRNAs; unlike most subunits, not shared between RNase MRP and nuclear RNase P
Top 10 interactors (score): SNM1 (0.999); POP3 (0.999); POP6 (0.999); RPP1 (0.999); POP1 (0.999); POP4 (0.999); POP7 (0.999); POP5 (0.999); POP8 (0.998); RPR2 (0.984); NOP1 (0.928); SNU13 (0.906); NOP58 (0.904); NOP56 (0.904); RRP9 (0.9); LCP5 (0.9); SMD3 (0.835); RPM2 (0.812); LSM4 (0.755); LSM3 (0.748)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:414650-415255:+ | gene-YLR145W_AKU4011 | rna-NM_001182032.1_AKU4011 | cds-NP_013246.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:378419-379024:+ | gene-YLR145W_BG1 | rna-NM_001182032.1_BG1 | cds-NP_013246.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:426546-427151:+ | gene-YLR145W_Bruggeman | rna-NM_001182032.1_Bruggeman | cds-NP_013246.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:425929-426534:+ | gene-YLR145W_CAT1 | rna-NM_001182032.1_CAT1 | cds-NP_013246.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:421793-422398:+ | gene-YLR145W_CBS1585 | rna-NM_001182032.1_CBS1585 | cds-NP_013246.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:412028-412633:+ | gene-YLR145W_CBS436 | rna-NM_001182032.1_CBS436 | cds-NP_013246.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:420211-420816:+ | gene-YLR145W_CBS6412 | rna-NM_001182032.1_CBS6412 | cds-NP_013246.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:422058-422663:+ | gene-YLR145W_CBS6413 | rna-NM_001182032.1_CBS6413 | cds-NP_013246.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:417186-417791:+ | gene-YLR145W_CENPK1137D | rna-NM_001182032.1_CENPK1137D | cds-NP_013246.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:414851-415456:+ | gene-YLR145W_EthanolRed | rna-NM_001182032.1_EthanolRed | cds-NP_013246.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:414362-414967:+ | gene-YLR145W_FaliES1 | rna-NM_001182032.1_FaliES1 | cds-NP_013246.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000061.1:21020-21625:+ | gene-YLR145W_JAY291 | rna-NM_001182032.1_JAY291 | cds-NP_013246.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:426551-427156:+ | gene-YLR145W_MUCL30387 | rna-NM_001182032.1_MUCL30387 | cds-NP_013246.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:431351-431956:+ | gene-YLR145W_MUCL30388 | rna-NM_001182032.1_MUCL30388 | cds-NP_013246.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:422302-422907:+ | gene-YLR145W_MUCL39482 | rna-NM_001182032.1_MUCL39482 | cds-NP_013246.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:422456-423061:+ | gene-YLR145W_MUCL42920 | rna-NM_001182032.1_MUCL42920 | cds-NP_013246.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:432142-432747:+ | gene-YLR145W_NCIM3186 | rna-NM_001182032.1_NCIM3186 | cds-NP_013246.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:414574-415179:+ | gene-YLR145W_NCYC1407 | rna-NM_001182032.1_NCYC1407 | cds-NP_013246.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:420129-420734:+ | gene-YLR145W_PE2H3 | rna-NM_001182032.1_PE2H3 | cds-NP_013246.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:419870-420475:+ | gene-YLR145W_PE2H4 | rna-NM_001182032.1_PE2H4 | cds-NP_013246.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:432168-432773:+ | gene-YLR145W_S288C | rna-NM_001182032.1_S288C | cds-NP_013246.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000055.1:58065-58670:+ | gene-YLR145W_SA1 | rna-NM_001182032.1_SA1 | cds-NP_013246.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:415572-416177:+ | gene-YLR145W_ThermosaccDry | rna-NM_001182032.1_ThermosaccDry | cds-NP_013246.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:428270-428875:+ | gene-YLR145W_VR1 | rna-NM_001182032.1_VR1 | cds-NP_013246.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:413358-413963:+ | gene-YLR145W_ZTW1 | rna-NM_001182032.1_ZTW1 | cds-NP_013246.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:423505-424110:+ | gene-YLR145W_Sparadoxus | rna-NM_001182032.1_Sparadoxus | cds-NP_013246.1_Sparadoxus | 86.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |