Gene name: RML2
Reference locus (S288C): YEL050C
Gene biotype: protein_coding
Description: Mitochondrial ribosomal protein of the large subunit (L2); has similarity to E. coli L2 ribosomal protein; mutant allele (fat21) causes inability to utilize oleate, and induce oleic acid oxidation; may interfere with activity of the Adr1p transcription factor
Top 10 interactors (score): MRPS9 (0.999); MRPS16 (0.999); MRPL10 (0.999); RSM7 (0.999); MRPL16 (0.999); MRPL9 (0.999); RSM19 (0.999); MRPL8 (0.999); MRP7 (0.999); IMG1 (0.999); MRPS5 (0.999); MRPS12 (0.999); RSM18 (0.999); MRPL51 (0.999); MRPL22 (0.999); MRPL17 (0.999); MRPL32 (0.998); YML6 (0.998); MRP17 (0.998); MRPL28 (0.998)
Homologues (species, bitscore): MRPL2 (Homo sapiens, 113.6); Mrpl2 (Mus musculus, 111.3); MRPL2 (Danio rerio, 120.9); rpl8 (Xenopus tropicalis, 84.3); RpL8 (Drosophila melanogaster, 80.9); rpl-2 (Caenorhabditis elegans, 79.7); RPL2.1 (Arabidopsis thaliana, 154.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:54075-55256:- | gene-YEL050C_AKU4011 | rna-NM_001178865.3_AKU4011 | cds-NP_010864.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000075.1:25244-26425:+ | gene-YEL050C_BG1 | rna-NM_001178865.3_BG1 | cds-NP_010864.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:57593-58774:- | gene-YEL050C_Bruggeman | rna-NM_001178865.3_Bruggeman | cds-NP_010864.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:56015-57196:- | gene-YEL050C_CAT1 | rna-NM_001178865.3_CAT1 | cds-NP_010864.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:54020-55201:- | gene-YEL050C_CBS1585 | rna-NM_001178865.3_CBS1585 | cds-NP_010864.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:55081-56262:- | gene-YEL050C_CBS436 | rna-NM_001178865.3_CBS436 | cds-NP_010864.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:54272-55453:- | gene-YEL050C_CBS6412 | rna-NM_001178865.3_CBS6412 | cds-NP_010864.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:58916-60097:- | gene-YEL050C_CBS6413 | rna-NM_001178865.3_CBS6413 | cds-NP_010864.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:57508-58689:- | gene-YEL050C_CENPK1137D | rna-NM_001178865.3_CENPK1137D | cds-NP_010864.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:53830-55011:- | gene-YEL050C_EthanolRed | rna-NM_001178865.3_EthanolRed | cds-NP_010864.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:54093-55274:- | gene-YEL050C_FaliES1 | rna-NM_001178865.3_FaliES1 | cds-NP_010864.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000427.1:2774-3955:+ | gene-YEL050C_JAY291 | rna-NM_001178865.3_JAY291 | cds-NP_010864.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:58027-59208:- | gene-YEL050C_MUCL30387 | rna-NM_001178865.3_MUCL30387 | cds-NP_010864.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:54142-55323:- | gene-YEL050C_MUCL30388 | rna-NM_001178865.3_MUCL30388 | cds-NP_010864.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:53388-54569:- | gene-YEL050C_MUCL39482 | rna-NM_001178865.3_MUCL39482 | cds-NP_010864.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:58028-59209:- | gene-YEL050C_MUCL42920 | rna-NM_001178865.3_MUCL42920 | cds-NP_010864.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:59669-60850:- | gene-YEL050C_NCIM3186 | rna-NM_001178865.3_NCIM3186 | cds-NP_010864.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:58483-59664:- | gene-YEL050C_NCYC1407 | rna-NM_001178865.3_NCYC1407 | cds-NP_010864.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:62497-63678:- | gene-YEL050C_PE2H3 | rna-NM_001178865.3_PE2H3 | cds-NP_010864.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:58414-59595:- | gene-YEL050C_PE2H4 | rna-NM_001178865.3_PE2H4 | cds-NP_010864.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:59670-60851:- | gene-YEL050C_S288C | rna-NM_001178865.3_S288C | cds-NP_010864.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000053.1:26138-27310:+ | gene-YEL050C_SA1 | rna-NM_001178865.3_SA1 | cds-NP_010864.3_SA1 | 98.9 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:54493-55674:- | gene-YEL050C_ThermosaccDry | rna-NM_001178865.3_ThermosaccDry | cds-NP_010864.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:53705-54886:- | gene-YEL050C_VR1 | rna-NM_001178865.3_VR1 | cds-NP_010864.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:53428-54609:- | gene-YEL050C_ZTW1 | rna-NM_001178865.3_ZTW1 | cds-NP_010864.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:57709-58890:- | gene-YEL050C_Sparadoxus | rna-NM_001178865.3_Sparadoxus | cds-NP_010864.3_Sparadoxus | 92.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |