Gene name: RMI1
Reference locus (S288C): YPL024W
Gene biotype: protein_coding
Description: RecQ-mediated genome instability protein 1; Subunit of the RecQ (Sgs1p) - Topo III (Top3p) complex; stimulates superhelical relaxing, DNA catenation/decatenation and ssDNA binding activities of Top3p; involved in response to DNA damage; functions in S phase-mediated cohesion establishment via a pathway involving the Ctf18-RFC complex and Mrc1p; stimulates Top3p DNA catenation/decatenation activity; null mutants display increased rates of recombination and delayed S phase
Top 10 interactors (score): MUS81 (0.999); SGS1 (0.999); TOP3 (0.999); RAD1 (0.996); DNA2 (0.996); MPH1 (0.995); RAD51 (0.994); SLX1 (0.984); SRS2 (0.982); EXO1 (0.976); MMS4 (0.975); RAD52 (0.961); YEN1 (0.952); RFA1 (0.93); MLH1 (0.93); RAD54 (0.928); SMC5 (0.925); SPO11 (0.924); MEC1 (0.92); SLX4 (0.92)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:475007-475732:+ | gene-YPL024W_AKU4011 | rna-NM_001183838.1_AKU4011 | cds-NP_015301.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:421614-422339:- | gene-YPL024W_BG1 | rna-NM_001183838.1_BG1 | cds-NP_015301.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:551956-552681:+ | gene-YPL024W_Bruggeman | rna-NM_001183838.1_Bruggeman | cds-NP_015301.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:591620-592345:+ | gene-YPL024W_CAT1 | rna-NM_001183838.1_CAT1 | cds-NP_015301.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:479077-479802:+ | gene-YPL024W_CBS1585 | rna-NM_001183838.1_CBS1585 | cds-NP_015301.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:493206-493931:+ | gene-YPL024W_CBS436 | rna-NM_001183838.1_CBS436 | cds-NP_015301.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:483270-483995:+ | gene-YPL024W_CBS6412 | rna-NM_001183838.1_CBS6412 | cds-NP_015301.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:475630-476355:+ | gene-YPL024W_CBS6413 | rna-NM_001183838.1_CBS6413 | cds-NP_015301.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:503492-504217:+ | gene-YPL024W_CENPK1137D | rna-NM_001183838.1_CENPK1137D | cds-NP_015301.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:473370-474095:+ | gene-YPL024W_EthanolRed | rna-NM_001183838.1_EthanolRed | cds-NP_015301.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:481200-481925:+ | gene-YPL024W_FaliES1 | rna-NM_001183838.1_FaliES1 | cds-NP_015301.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000283.1:89803-90528:+ | gene-YPL024W_JAY291 | rna-NM_001183838.1_JAY291 | cds-NP_015301.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:492904-493629:+ | gene-YPL024W_MUCL30387 | rna-NM_001183838.1_MUCL30387 | cds-NP_015301.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:492012-492737:+ | gene-YPL024W_MUCL30388 | rna-NM_001183838.1_MUCL30388 | cds-NP_015301.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:472394-473119:+ | gene-YPL024W_MUCL39482 | rna-NM_001183838.1_MUCL39482 | cds-NP_015301.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:531524-532249:+ | gene-YPL024W_MUCL42920 | rna-NM_001183838.1_MUCL42920 | cds-NP_015301.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:503500-504225:+ | gene-YPL024W_NCIM3186 | rna-NM_001183838.1_NCIM3186 | cds-NP_015301.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:479673-480398:+ | gene-YPL024W_NCYC1407 | rna-NM_001183838.1_NCYC1407 | cds-NP_015301.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:486330-487055:+ | gene-YPL024W_PE2H3 | rna-NM_001183838.1_PE2H3 | cds-NP_015301.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:485945-486670:+ | gene-YPL024W_PE2H4 | rna-NM_001183838.1_PE2H4 | cds-NP_015301.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:503517-504242:+ | gene-YPL024W_S288C | rna-NM_001183838.1_S288C | cds-NP_015301.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000076.1:195-920:+ | gene-YPL024W_SA1 | rna-NM_001183838.1_SA1 | cds-NP_015301.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:480999-481724:+ | gene-YPL024W_ThermosaccDry | rna-NM_001183838.1_ThermosaccDry | cds-NP_015301.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:495887-496612:+ | gene-YPL024W_VR1 | rna-NM_001183838.1_VR1 | cds-NP_015301.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:480289-481014:+ | gene-YPL024W_ZTW1 | rna-NM_001183838.1_ZTW1 | cds-NP_015301.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:480219-480944:+ | gene-YPL024W_Sparadoxus | rna-NM_001183838.1_Sparadoxus | cds-NP_015301.1_Sparadoxus | 91.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |