RME3 (YNCG0001C)

Gene profile

Gene name: RME3
Reference locus (S288C): YNCG0001C
Gene biotype: antisense_RNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:34634-36538:- gene-YNCG0001C_AKU4011 rna-NR_132176.1_AKU4011 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000175.1:26673-28577:- gene-YNCG0001C_BG1 rna-NR_132176.1_BG1 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:34989-36893:- gene-YNCG0001C_Bruggeman rna-NR_132176.1_Bruggeman Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:33061-34965:- gene-YNCG0001C_CAT1 rna-NR_132176.1_CAT1 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:38922-40826:- gene-YNCG0001C_CBS1585 rna-NR_132176.1_CBS1585 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005349.1:33650-35554:- gene-YNCG0001C_CBS436 rna-NR_132176.1_CBS436 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:26490-28394:- gene-YNCG0001C_CBS6412 rna-NR_132176.1_CBS6412 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:32778-34682:- gene-YNCG0001C_CBS6413 rna-NR_132176.1_CBS6413 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:32771-34675:- gene-YNCG0001C_CENPK1137D rna-NR_132176.1_CENPK1137D Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:25911-27815:- gene-YNCG0001C_EthanolRed rna-NR_132176.1_EthanolRed Unknown 99.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:26272-28176:- gene-YNCG0001C_FaliES1 rna-NR_132176.1_FaliES1 Unknown 99.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000079.1:38905-40809:+ gene-YNCG0001C_JAY291 rna-NR_132176.1_JAY291 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:34926-36830:- gene-YNCG0001C_MUCL30387 rna-NR_132176.1_MUCL30387 Unknown 99.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:37079-38983:- gene-YNCG0001C_MUCL30388 rna-NR_132176.1_MUCL30388 Unknown 99.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:35519-37423:- gene-YNCG0001C_MUCL39482 rna-NR_132176.1_MUCL39482 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:38412-40316:- gene-YNCG0001C_MUCL42920 rna-NR_132176.1_MUCL42920 Unknown 99.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:33109-35013:- gene-YNCG0001C_NCIM3186 rna-NR_132176.1_NCIM3186 Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:27283-29187:- gene-YNCG0001C_NCYC1407 rna-NR_132176.1_NCYC1407 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:29139-31043:- gene-YNCG0001C_PE2H3 rna-NR_132176.1_PE2H3 Unknown 99.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:28687-30591:- gene-YNCG0001C_PE2H4 rna-NR_132176.1_PE2H4 Unknown 99.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:33109-35013:- gene-YNCG0001C_S288C rna-NR_132176.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:340321-342225:+ gene-YNCG0001C_SA1 rna-NR_132176.1_SA1 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:26587-28491:- gene-YNCG0001C_ThermosaccDry rna-NR_132176.1_ThermosaccDry Unknown 99.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:33576-35480:- gene-YNCG0001C_VR1 rna-NR_132176.1_VR1 Unknown 99.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000014.1:25661-27564:- gene-YNCG0001C_ZTW1 rna-NR_132176.1_ZTW1 Unknown 98.9 99.9 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:34332-36234:- gene-YNCG0001C_Sparadoxus rna-NR_132176.1_Sparadoxus Unknown 83.4 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files