Gene name: RME1
Reference locus (S288C): YGR044C
Gene biotype: protein_coding
Description: Zinc finger protein involved in control of meiosis; prevents meiosis by repressing IME1 expression and promotes mitosis by activating CLN2 expression; directly repressed by a1-alpha2 regulator; mediates cell type control of sporulation; relocalizes from nucleus to cytoplasm upon DNA replication stress
Top 10 interactors (score): HMLALPHA2 (0.951); IME1 (0.938); SGA1 (0.91); RSF1 (0.819); SWI4 (0.819); IME2 (0.804); HMRA1 (0.8); TAO3 (0.785); SIN4 (0.777); MATALPHA2 (0.767); UME6 (0.76); IME4 (0.751); HIS4 (0.751); MKT1 (0.745); SWI6 (0.718); RGR1 (0.708); HMLALPHA1 (0.69); TUP1 (0.687); URA3 (0.679); MATALPHA1 (0.678)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:566689-567591:- | gene-YGR044C_AKU4011 | rna-NM_001181173.1_AKU4011 | cds-NP_011558.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:8241-9143:+ | gene-YGR044C_BG1 | rna-NM_001181173.1_BG1 | cds-NP_011558.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:568982-569884:- | gene-YGR044C_Bruggeman | rna-NM_001181173.1_Bruggeman | cds-NP_011558.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:567386-568288:- | gene-YGR044C_CAT1 | rna-NM_001181173.1_CAT1 | cds-NP_011558.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:568002-568904:- | gene-YGR044C_CBS1585 | rna-NM_001181173.1_CBS1585 | cds-NP_011558.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:569309-570199:- | gene-YGR044C_CBS436 | rna-NM_001181173.1_CBS436 | cds-NP_011558.1_CBS436 | 98.6 | 98.6 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:560798-561700:- | gene-YGR044C_CBS6412 | rna-NM_001181173.1_CBS6412 | cds-NP_011558.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:564798-565700:- | gene-YGR044C_CBS6413 | rna-NM_001181173.1_CBS6413 | cds-NP_011558.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:582825-583611:- | gene-YGR044C_CENPK1137D | rna-NM_001181173.1_CENPK1137D | cds-NP_011558.1_CENPK1137D | 84.9 | 87.1 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:554931-555833:- | gene-YGR044C_EthanolRed | rna-NM_001181173.1_EthanolRed | cds-NP_011558.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:558415-559317:- | gene-YGR044C_FaliES1 | rna-NM_001181173.1_FaliES1 | cds-NP_011558.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000435.1:9385-10287:- | gene-YGR044C_JAY291 | rna-NM_001181173.1_JAY291 | cds-NP_011558.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:565614-566516:- | gene-YGR044C_MUCL30387 | rna-NM_001181173.1_MUCL30387 | cds-NP_011558.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:569010-569912:- | gene-YGR044C_MUCL30388 | rna-NM_001181173.1_MUCL30388 | cds-NP_011558.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:563820-564722:- | gene-YGR044C_MUCL39482 | rna-NM_001181173.1_MUCL39482 | cds-NP_011558.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:573632-574534:- | gene-YGR044C_MUCL42920 | rna-NM_001181173.1_MUCL42920 | cds-NP_011558.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:582990-583892:- | gene-YGR044C_NCIM3186 | rna-NM_001181173.1_NCIM3186 | cds-NP_011558.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:558015-558917:- | gene-YGR044C_NCYC1407 | rna-NM_001181173.1_NCYC1407 | cds-NP_011558.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:561286-562188:- | gene-YGR044C_PE2H3 | rna-NM_001181173.1_PE2H3 | cds-NP_011558.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:566393-567295:- | gene-YGR044C_PE2H4 | rna-NM_001181173.1_PE2H4 | cds-NP_011558.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:582990-583892:- | gene-YGR044C_S288C | rna-NM_001181173.1_S288C | cds-NP_011558.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:9442-10344:- | gene-YGR044C_SA1 | rna-NM_001181173.1_SA1 | cds-NP_011558.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:577752-578654:- | gene-YGR044C_ThermosaccDry | rna-NM_001181173.1_ThermosaccDry | cds-NP_011558.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:674664-675566:- | gene-YGR044C_VR1 | rna-NM_001181173.1_VR1 | cds-NP_011558.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:33230-34132:- | gene-YGR044C_ZTW1 | rna-NM_001181173.1_ZTW1 | cds-NP_011558.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:568091-568984:- | gene-YGR044C_Sparadoxus | rna-NM_001181173.1_Sparadoxus | cds-NP_011558.1_Sparadoxus | 83.9 | 98.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |