Gene name: RMD9
Reference locus (S288C): YGL107C
Gene biotype: protein_coding
Description: Mitochondrial protein required for respiratory growth; mutant phenotype and genetic interactions suggest a role in delivering mt mRNAs to ribosomes; located on matrix face of the inner membrane and loosely associated with mitoribosomes; RMD9 has a paralog, YBR238C, that arose from the whole genome duplication
Top 10 interactors (score): RSM28 (0.92); AEP3 (0.891); ATP22 (0.813); OXA1 (0.785); PUF3 (0.771); GUF1 (0.762); PET111 (0.756); PET112 (0.744); PET309 (0.729); IFM1 (0.726); SOV1 (0.712); MSC6 (0.71); TRI1 (0.706); PTH4 (0.696); COA1 (0.694); CBP3 (0.691); CBS2 (0.691); GEP3 (0.688); NCA2 (0.675); MTF2 (0.674)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:307659-309599:- | gene-YGL107C_AKU4011 | rna-NM_001180972.1_AKU4011 | cds-NP_011408.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:96147-98087:+ | gene-YGL107C_BG1 | rna-NM_001180972.1_BG1 | cds-NP_011408.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:309818-311758:- | gene-YGL107C_Bruggeman | rna-NM_001180972.1_Bruggeman | cds-NP_011408.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:305340-307280:- | gene-YGL107C_CAT1 | rna-NM_001180972.1_CAT1 | cds-NP_011408.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:310985-312925:- | gene-YGL107C_CBS1585 | rna-NM_001180972.1_CBS1585 | cds-NP_011408.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:305288-307228:- | gene-YGL107C_CBS436 | rna-NM_001180972.1_CBS436 | cds-NP_011408.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:295678-297618:- | gene-YGL107C_CBS6412 | rna-NM_001180972.1_CBS6412 | cds-NP_011408.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:305283-307223:- | gene-YGL107C_CBS6413 | rna-NM_001180972.1_CBS6413 | cds-NP_011408.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:304520-306460:- | gene-YGL107C_CENPK1137D | rna-NM_001180972.1_CENPK1137D | cds-NP_011408.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:296732-298672:- | gene-YGL107C_EthanolRed | rna-NM_001180972.1_EthanolRed | cds-NP_011408.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:299287-301227:- | gene-YGL107C_FaliES1 | rna-NM_001180972.1_FaliES1 | cds-NP_011408.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000046.1:919-2859:+ | gene-YGL107C_JAY291 | rna-NM_001180972.1_JAY291 | cds-NP_011408.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:306788-308728:- | gene-YGL107C_MUCL30387 | rna-NM_001180972.1_MUCL30387 | cds-NP_011408.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:309879-311819:- | gene-YGL107C_MUCL30388 | rna-NM_001180972.1_MUCL30388 | cds-NP_011408.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:307498-309438:- | gene-YGL107C_MUCL39482 | rna-NM_001180972.1_MUCL39482 | cds-NP_011408.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:310777-312717:- | gene-YGL107C_MUCL42920 | rna-NM_001180972.1_MUCL42920 | cds-NP_011408.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:304333-306273:- | gene-YGL107C_NCIM3186 | rna-NM_001180972.1_NCIM3186 | cds-NP_011408.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:298988-300928:- | gene-YGL107C_NCYC1407 | rna-NM_001180972.1_NCYC1407 | cds-NP_011408.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:300372-302312:- | gene-YGL107C_PE2H3 | rna-NM_001180972.1_PE2H3 | cds-NP_011408.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:305370-307310:- | gene-YGL107C_PE2H4 | rna-NM_001180972.1_PE2H4 | cds-NP_011408.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:304333-306273:- | gene-YGL107C_S288C | rna-NM_001180972.1_S288C | cds-NP_011408.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000064.1:49120-51060:- | gene-YGL107C_SA1 | rna-NM_001180972.1_SA1 | cds-NP_011408.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:299499-301439:- | gene-YGL107C_ThermosaccDry | rna-NM_001180972.1_ThermosaccDry | cds-NP_011408.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:409095-411035:- | gene-YGL107C_VR1 | rna-NM_001180972.1_VR1 | cds-NP_011408.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:296896-298836:- | gene-YGL107C_ZTW1 | rna-NM_001180972.1_ZTW1 | cds-NP_011408.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:303319-305259:- | gene-YGL107C_Sparadoxus | rna-NM_001180972.1_Sparadoxus | cds-NP_011408.1_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |