Gene name: RMA1
Reference locus (S288C): YKL132C
Gene biotype: protein_coding
Description: Probable folylpolyglutamate synthase; Putative dihydrofolate synthetase; similar to E. coli folylpolyglutamate synthetase/dihydrofolate synthetase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; RMA1 has a paralog, FOL3, that arose from the whole genome duplication
Top 10 interactors (score): SHM1 (0.985); MIS1 (0.975); DFR1 (0.961); FOL3 (0.954); SHM2 (0.951); ADE3 (0.945); FOL1 (0.945); CDC21 (0.922); MET7 (0.899); FOL2 (0.888); MET12 (0.866); CAB5 (0.794); TRP3 (0.77); YBR013C (0.75); YMR103C (0.75); SLM2 (0.744); TRP5 (0.711); PMU1 (0.711); KTR4 (0.71); FAU1 (0.706)
Homologues (species, bitscore): fpgs (Xenopus tropicalis, 52.8); GLA1 (Arabidopsis thaliana, 79.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:180470-181762:- | gene-YKL132C_AKU4011 | rna-NM_001179698.1_AKU4011 | cds-NP_012790.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:157634-158926:- | gene-YKL132C_BG1 | rna-NM_001179698.1_BG1 | cds-NP_012790.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:198132-199424:- | gene-YKL132C_Bruggeman | rna-NM_001179698.1_Bruggeman | cds-NP_012790.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:193455-194747:- | gene-YKL132C_CAT1 | rna-NM_001179698.1_CAT1 | cds-NP_012790.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:192722-194014:- | gene-YKL132C_CBS1585 | rna-NM_001179698.1_CBS1585 | cds-NP_012790.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:191312-192604:- | gene-YKL132C_CBS436 | rna-NM_001179698.1_CBS436 | cds-NP_012790.1_CBS436 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:177344-178636:- | gene-YKL132C_CBS6412 | rna-NM_001179698.1_CBS6412 | cds-NP_012790.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:193167-194459:- | gene-YKL132C_CBS6413 | rna-NM_001179698.1_CBS6413 | cds-NP_012790.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:193218-194510:- | gene-YKL132C_CENPK1137D | rna-NM_001179698.1_CENPK1137D | cds-NP_012790.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:191203-192495:- | gene-YKL132C_EthanolRed | rna-NM_001179698.1_EthanolRed | cds-NP_012790.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:192015-193307:- | gene-YKL132C_FaliES1 | rna-NM_001179698.1_FaliES1 | cds-NP_012790.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:14345-15637:- | gene-YKL132C_JAY291 | rna-NM_001179698.1_JAY291 | cds-NP_012790.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:200233-201525:- | gene-YKL132C_MUCL30387 | rna-NM_001179698.1_MUCL30387 | cds-NP_012790.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:194584-195876:- | gene-YKL132C_MUCL30388 | rna-NM_001179698.1_MUCL30388 | cds-NP_012790.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:192500-193792:- | gene-YKL132C_MUCL39482 | rna-NM_001179698.1_MUCL39482 | cds-NP_012790.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:196894-198186:- | gene-YKL132C_MUCL42920 | rna-NM_001179698.1_MUCL42920 | cds-NP_012790.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:193563-194855:- | gene-YKL132C_NCIM3186 | rna-NM_001179698.1_NCIM3186 | cds-NP_012790.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:192690-193982:- | gene-YKL132C_NCYC1407 | rna-NM_001179698.1_NCYC1407 | cds-NP_012790.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:199813-201105:- | gene-YKL132C_PE2H3 | rna-NM_001179698.1_PE2H3 | cds-NP_012790.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:196101-197393:- | gene-YKL132C_PE2H4 | rna-NM_001179698.1_PE2H4 | cds-NP_012790.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:193574-194866:- | gene-YKL132C_S288C | rna-NM_001179698.1_S288C | cds-NP_012790.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:110042-111334:- | gene-YKL132C_SA1 | rna-NM_001179698.1_SA1 | cds-NP_012790.1_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:192715-194007:- | gene-YKL132C_ThermosaccDry | rna-NM_001179698.1_ThermosaccDry | cds-NP_012790.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:192071-193363:- | gene-YKL132C_VR1 | rna-NM_001179698.1_VR1 | cds-NP_012790.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:191247-192539:- | gene-YKL132C_ZTW1 | rna-NM_001179698.1_ZTW1 | cds-NP_012790.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:207945-209240:- | gene-YKL132C_Sparadoxus | rna-NM_001179698.1_Sparadoxus | cds-NP_012790.1_Sparadoxus | 87.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |