Gene name: RKI1
Reference locus (S288C): YOR095C
Gene biotype: protein_coding
Description: Ribose-5-phosphate ketol-isomerase; catalyzes the interconversion of ribose 5-phosphate and ribulose 5-phosphate in the pentose phosphate pathway; participates in pyridoxine biosynthesis
Top 10 interactors (score): RPE1 (0.999); TKL1 (0.998); TKL2 (0.995); RBK1 (0.979); PRS1 (0.977); TAL1 (0.976); GND1 (0.973); GND2 (0.971); PRM15 (0.968); PRS3 (0.965); FRA1 (0.964); ADE12 (0.963); ADH4 (0.963); APE4 (0.962); TPI1 (0.959); PRS4 (0.957); XKS1 (0.95); PRS5 (0.947); PRS2 (0.944); PGM1 (0.944)
Homologues (species, bitscore): RPIA (Homo sapiens, 207.2); Rpia (Mus musculus, 214.2); rpia (Danio rerio, 219.5); rpia (Xenopus tropicalis, 216.5); Rpi (Drosophila melanogaster, 209.9); rpia-1 (Caenorhabditis elegans, 152.5); RPI2 (Arabidopsis thaliana, 119.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:487624-488400:- | gene-YOR095C_AKU4011 | rna-NM_001183514.1_AKU4011 | cds-NP_014738.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:90650-91426:+ | gene-YOR095C_BG1 | rna-NM_001183514.1_BG1 | cds-NP_014738.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:491214-491990:- | gene-YOR095C_Bruggeman | rna-NM_001183514.1_Bruggeman | cds-NP_014738.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:491189-491965:- | gene-YOR095C_CAT1 | rna-NM_001183514.1_CAT1 | cds-NP_014738.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:482916-483692:- | gene-YOR095C_CBS1585 | rna-NM_001183514.1_CBS1585 | cds-NP_014738.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:487949-488725:- | gene-YOR095C_CBS436 | rna-NM_001183514.1_CBS436 | cds-NP_014738.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:481657-482433:- | gene-YOR095C_CBS6412 | rna-NM_001183514.1_CBS6412 | cds-NP_014738.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:488952-489728:- | gene-YOR095C_CBS6413 | rna-NM_001183514.1_CBS6413 | cds-NP_014738.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:503597-504373:- | gene-YOR095C_CENPK1137D | rna-NM_001183514.1_CENPK1137D | cds-NP_014738.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:484155-484931:- | gene-YOR095C_EthanolRed | rna-NM_001183514.1_EthanolRed | cds-NP_014738.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:487664-488440:- | gene-YOR095C_FaliES1 | rna-NM_001183514.1_FaliES1 | cds-NP_014738.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000063.1:70797-71573:+ | gene-YOR095C_JAY291 | rna-NM_001183514.1_JAY291 | cds-NP_014738.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:495750-496526:- | gene-YOR095C_MUCL30387 | rna-NM_001183514.1_MUCL30387 | cds-NP_014738.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:500936-501712:- | gene-YOR095C_MUCL30388 | rna-NM_001183514.1_MUCL30388 | cds-NP_014738.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:490552-491328:- | gene-YOR095C_MUCL39482 | rna-NM_001183514.1_MUCL39482 | cds-NP_014738.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:506656-507432:- | gene-YOR095C_MUCL42920 | rna-NM_001183514.1_MUCL42920 | cds-NP_014738.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:503441-504217:- | gene-YOR095C_NCIM3186 | rna-NM_001183514.1_NCIM3186 | cds-NP_014738.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:497013-497789:- | gene-YOR095C_NCYC1407 | rna-NM_001183514.1_NCYC1407 | cds-NP_014738.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:496022-496798:- | gene-YOR095C_PE2H3 | rna-NM_001183514.1_PE2H3 | cds-NP_014738.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:506398-507174:- | gene-YOR095C_PE2H4 | rna-NM_001183514.1_PE2H4 | cds-NP_014738.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:503552-504328:- | gene-YOR095C_S288C | rna-NM_001183514.1_S288C | cds-NP_014738.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000098.1:18480-19256:+ | gene-YOR095C_SA1 | rna-NM_001183514.1_SA1 | cds-NP_014738.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:486818-487594:- | gene-YOR095C_ThermosaccDry | rna-NM_001183514.1_ThermosaccDry | cds-NP_014738.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:488943-489719:- | gene-YOR095C_VR1 | rna-NM_001183514.1_VR1 | cds-NP_014738.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:220805-221581:- | gene-YOR095C_ZTW1 | rna-NM_001183514.1_ZTW1 | cds-NP_014738.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:492812-493588:- | gene-YOR095C_Sparadoxus | rna-NM_001183514.1_Sparadoxus | cds-NP_014738.1_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |