Gene name: RIT1
Reference locus (S288C): YMR283C
Gene biotype: protein_coding
Description: tRNA A64-2'-O-ribosylphosphate transferase; Initiator methionine 2'-O-ribosyl phosphate transferase; modifies the initiator methionine tRNA at position 64 to distinguish it from elongator methionine tRNA
Top 10 interactors (score): IWR1 (0.81); LOS1 (0.785); TYW3 (0.749); RPO31 (0.721); PUS7 (0.674); YKR018C (0.644); IML2 (0.644); TCB1 (0.62); TRM7 (0.617); RPC82 (0.584); MOD5 (0.574); IST2 (0.562); TIF4631 (0.546); DEG1 (0.499); TFC6 (0.494); RPB5 (0.482); GCD2 (0.457); RPC11 (0.402)
Homologues (species, bitscore): AT2G40570 (Arabidopsis thaliana, 166.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:874377-875918:- | gene-YMR283C_AKU4011 | rna-NM_001182790.1_AKU4011 | cds-NP_014010.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:77754-79295:+ | gene-YMR283C_BG1 | rna-NM_001182790.1_BG1 | cds-NP_014010.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:819587-821128:- | gene-YMR283C_Bruggeman | rna-NM_001182790.1_Bruggeman | cds-NP_014010.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:822872-824413:- | gene-YMR283C_CAT1 | rna-NM_001182790.1_CAT1 | cds-NP_014010.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:806627-808168:- | gene-YMR283C_CBS1585 | rna-NM_001182790.1_CBS1585 | cds-NP_014010.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:828943-830484:- | gene-YMR283C_CBS436 | rna-NM_001182790.1_CBS436 | cds-NP_014010.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:918201-919742:- | gene-YMR283C_CBS6412 | rna-NM_001182790.1_CBS6412 | cds-NP_014010.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:805748-807289:- | gene-YMR283C_CBS6413 | rna-NM_001182790.1_CBS6413 | cds-NP_014010.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:829872-831413:- | gene-YMR283C_CENPK1137D | rna-NM_001182790.1_CENPK1137D | cds-NP_014010.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:867067-868608:- | gene-YMR283C_EthanolRed | rna-NM_001182790.1_EthanolRed | cds-NP_014010.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:813094-814635:- | gene-YMR283C_FaliES1 | rna-NM_001182790.1_FaliES1 | cds-NP_014010.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000262.1:37097-38638:+ | gene-YMR283C_JAY291 | rna-NM_001182790.1_JAY291 | cds-NP_014010.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:813412-814953:- | gene-YMR283C_MUCL30387 | rna-NM_001182790.1_MUCL30387 | cds-NP_014010.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:822809-824350:- | gene-YMR283C_MUCL30388 | rna-NM_001182790.1_MUCL30388 | cds-NP_014010.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:807715-809256:- | gene-YMR283C_MUCL39482 | rna-NM_001182790.1_MUCL39482 | cds-NP_014010.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:816520-818061:- | gene-YMR283C_MUCL42920 | rna-NM_001182790.1_MUCL42920 | cds-NP_014010.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:835280-836821:- | gene-YMR283C_NCIM3186 | rna-NM_001182790.1_NCIM3186 | cds-NP_014010.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:807358-808899:- | gene-YMR283C_NCYC1407 | rna-NM_001182790.1_NCYC1407 | cds-NP_014010.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:823164-824705:- | gene-YMR283C_PE2H3 | rna-NM_001182790.1_PE2H3 | cds-NP_014010.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:819138-820679:- | gene-YMR283C_PE2H4 | rna-NM_001182790.1_PE2H4 | cds-NP_014010.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:835326-836867:- | gene-YMR283C_S288C | rna-NM_001182790.1_S288C | cds-NP_014010.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000036.1:12749-14290:- | gene-YMR283C_SA1 | rna-NM_001182790.1_SA1 | cds-NP_014010.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:809263-810804:- | gene-YMR283C_ThermosaccDry | rna-NM_001182790.1_ThermosaccDry | cds-NP_014010.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:822511-824052:- | gene-YMR283C_VR1 | rna-NM_001182790.1_VR1 | cds-NP_014010.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:224497-226038:- | gene-YMR283C_ZTW1 | rna-NM_001182790.1_ZTW1 | cds-NP_014010.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:827709-829193:- | gene-YMR283C_Sparadoxus | rna-NM_001182790.1_Sparadoxus | cds-NP_014010.1_Sparadoxus | 85.6 | 96.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |