Gene name: RIM9
Reference locus (S288C): YMR063W
Gene biotype: protein_coding
Description: pH-response regulator protein palI/RIM9; Plasma membrane protein of unknown function; involved in the proteolytic activation of Rim101p in response to alkaline pH; interacts with Rim21p and Dfg16p to form a pH-sensing complex in the Rim101 pathway and is required to maintain Rim21p levels; has similarity to A. nidulans PalI;
Top 10 interactors (score): RIM21 (0.994); DFG16 (0.986); RIM8 (0.971); RIM101 (0.952); RIM20 (0.948); RIM13 (0.917); YGR122W (0.813); SNF7 (0.767); STP22 (0.632); YLL067C (0.608); SUR7 (0.573); YOR389W (0.57); DID4 (0.556); ESL2 (0.553); VPS24 (0.552); ESL1 (0.527); IME1 (0.517); NRG1 (0.517); DPB4 (0.514); MCK1 (0.501)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:434791-435510:+ | gene-YMR063W_AKU4011 | rna-NM_001182561.1_AKU4011 | cds-NP_013779.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:107274-107993:- | gene-YMR063W_BG1 | rna-NM_001182561.1_BG1 | cds-NP_013779.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:376956-377675:+ | gene-YMR063W_Bruggeman | rna-NM_001182561.1_Bruggeman | cds-NP_013779.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:377297-378016:+ | gene-YMR063W_CAT1 | rna-NM_001182561.1_CAT1 | cds-NP_013779.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:367734-368453:+ | gene-YMR063W_CBS1585 | rna-NM_001182561.1_CBS1585 | cds-NP_013779.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:373289-374008:+ | gene-YMR063W_CBS436 | rna-NM_001182561.1_CBS436 | cds-NP_013779.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:481134-481853:+ | gene-YMR063W_CBS6412 | rna-NM_001182561.1_CBS6412 | cds-NP_013779.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:366991-367710:+ | gene-YMR063W_CBS6413 | rna-NM_001182561.1_CBS6413 | cds-NP_013779.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:391190-391909:+ | gene-YMR063W_CENPK1137D | rna-NM_001182561.1_CENPK1137D | cds-NP_013779.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:367586-368305:+ | gene-YMR063W_EthanolRed | rna-NM_001182561.1_EthanolRed | cds-NP_013779.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:370755-371474:+ | gene-YMR063W_FaliES1 | rna-NM_001182561.1_FaliES1 | cds-NP_013779.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:65470-66189:- | gene-YMR063W_JAY291 | rna-NM_001182561.1_JAY291 | cds-NP_013779.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:372699-373418:+ | gene-YMR063W_MUCL30387 | rna-NM_001182561.1_MUCL30387 | cds-NP_013779.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:377369-378088:+ | gene-YMR063W_MUCL30388 | rna-NM_001182561.1_MUCL30388 | cds-NP_013779.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:368022-368741:+ | gene-YMR063W_MUCL39482 | rna-NM_001182561.1_MUCL39482 | cds-NP_013779.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:374678-375397:+ | gene-YMR063W_MUCL42920 | rna-NM_001182561.1_MUCL42920 | cds-NP_013779.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:397031-397750:+ | gene-YMR063W_NCIM3186 | rna-NM_001182561.1_NCIM3186 | cds-NP_013779.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:367934-368653:+ | gene-YMR063W_NCYC1407 | rna-NM_001182561.1_NCYC1407 | cds-NP_013779.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:373886-374605:+ | gene-YMR063W_PE2H3 | rna-NM_001182561.1_PE2H3 | cds-NP_013779.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:379981-380700:+ | gene-YMR063W_PE2H4 | rna-NM_001182561.1_PE2H4 | cds-NP_013779.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:397077-397796:+ | gene-YMR063W_S288C | rna-NM_001182561.1_S288C | cds-NP_013779.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:152350-153069:- | gene-YMR063W_SA1 | rna-NM_001182561.1_SA1 | cds-NP_013779.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:368558-369277:+ | gene-YMR063W_ThermosaccDry | rna-NM_001182561.1_ThermosaccDry | cds-NP_013779.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:380471-381190:+ | gene-YMR063W_VR1 | rna-NM_001182561.1_VR1 | cds-NP_013779.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:346838-347557:+ | gene-YMR063W_ZTW1 | rna-NM_001182561.1_ZTW1 | cds-NP_013779.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:380436-381158:+ | gene-YMR063W_Sparadoxus | rna-NM_001182561.1_Sparadoxus | cds-NP_013779.1_Sparadoxus | 90.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |