Gene name: RIM15
Reference locus (S288C): YFL033C
Gene biotype: protein_coding
Description: Serine/threonine-protein kinase RIM15; Protein kinase involved in cell proliferation in response to nutrients; glucose-repressible; involved in signal transduction during cell proliferation in response to nutrients, specifically the establishment of stationary phase; identified as a regulator of IME2; phosphorylates Igo1p and Igo2p; substrate of Pho80p-Pho85p kinase
Top 10 interactors (score): IGO1 (0.997); MSN2 (0.994); IGO2 (0.994); GIS1 (0.994); MSN4 (0.988); SCH9 (0.977); TPK1 (0.957); UME6 (0.952); RAS2 (0.942); TOR1 (0.935); CDC55 (0.926); TPK3 (0.888); TPK2 (0.885); BCY1 (0.862); PHO80 (0.856); PHO85 (0.854); CYR1 (0.833); YAK1 (0.825); ADR1 (0.81); CHO1 (0.785)
Homologues (species, bitscore): STK38L (Homo sapiens, 218.0); Stk38l (Mus musculus, 214.5); mast2 (Danio rerio, 216.5); stk38l (Xenopus tropicalis, 215.7); dop (Drosophila melanogaster, 219.9); kin-4 (Caenorhabditis elegans, 214.9); IRE (Arabidopsis thaliana, 261.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005300.1:65444-70768:- | gene-YFL033C_AKU4011 | rna-NM_001179933.1_AKU4011 | cds-NP_116620.1_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000182.1:1-4279:+ | gene-YFL033C_BG1 | rna-NM_001179933.1_BG1 | cds-NP_116620.1_BG1 | 79.9 | 80.5 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005508.1:64323-69644:- | gene-YFL033C_Bruggeman | rna-NM_001179933.1_Bruggeman | cds-NP_116620.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005524.1:69217-74784:- | gene-YFL033C_CAT1 | rna-NM_001179933.1_CAT1 | cds-NP_116620.1_CAT1 | 94.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005364.1:66252-71576:- | gene-YFL033C_CBS1585 | rna-NM_001179933.1_CBS1585 | cds-NP_116620.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005348.1:39758-45079:- | gene-YFL033C_CBS436 | rna-NM_001179933.1_CBS436 | cds-NP_116620.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005332.1:65989-71310:- | gene-YFL033C_CBS6412 | rna-NM_001179933.1_CBS6412 | cds-NP_116620.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005316.1:68521-73845:- | gene-YFL033C_CBS6413 | rna-NM_001179933.1_CBS6413 | cds-NP_116620.1_CBS6413 | 99.0 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001527.1:65447-70759:- | gene-YFL033C_CENPK1137D | rna-NM_001179933.1_CENPK1137D | cds-NP_116620.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005476.1:64571-69727:- | gene-YFL033C_EthanolRed | rna-NM_001179933.1_EthanolRed | cds-NP_116620.1_EthanolRed | 96.4 | 97.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005540.1:65994-71368:- | gene-YFL033C_FaliES1 | rna-NM_001179933.1_FaliES1 | cds-NP_116620.1_FaliES1 | 98.1 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000448.1:74449-79761:- | gene-YFL033C_JAY291 | rna-NM_001179933.1_JAY291 | cds-NP_116620.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005412.1:66419-71740:- | gene-YFL033C_MUCL30387 | rna-NM_001179933.1_MUCL30387 | cds-NP_116620.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005444.1:64313-69634:- | gene-YFL033C_MUCL30388 | rna-NM_001179933.1_MUCL30388 | cds-NP_116620.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005284.1:64637-69961:- | gene-YFL033C_MUCL39482 | rna-NM_001179933.1_MUCL39482 | cds-NP_116620.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005428.1:62737-68079:- | gene-YFL033C_MUCL42920 | rna-NM_001179933.1_MUCL42920 | cds-NP_116620.1_MUCL42920 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011815.1:69114-74426:- | gene-YFL033C_NCIM3186 | rna-NM_001179933.1_NCIM3186 | cds-NP_116620.1_NCIM3186 | 96.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005268.1:65711-71047:- | gene-YFL033C_NCYC1407 | rna-NM_001179933.1_NCYC1407 | cds-NP_116620.1_NCYC1407 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994145.1:85604-90943:- | gene-YFL033C_PE2H3 | rna-NM_001179933.1_PE2H3 | cds-NP_116620.1_PE2H3 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999877.1:85155-90494:- | gene-YFL033C_PE2H4 | rna-NM_001179933.1_PE2H4 | cds-NP_116620.1_PE2H4 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001138.5:69115-74427:- | gene-YFL033C_S288C | rna-NM_001179933.1_S288C | cds-NP_116620.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:261197-266521:+ | gene-YFL033C_SA1 | rna-NM_001179933.1_SA1 | cds-NP_116620.1_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005492.1:65187-70549:- | gene-YFL033C_ThermosaccDry | rna-NM_001179933.1_ThermosaccDry | cds-NP_116620.1_ThermosaccDry | 98.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005460.1:73729-79091:- | gene-YFL033C_VR1 | rna-NM_001179933.1_VR1 | cds-NP_116620.1_VR1 | 98.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000012.1:50487-54802:- | gene-YFL033C_ZTW1 | rna-NM_001179933.1_ZTW1 | cds-NP_116620.1_ZTW1 | 80.3 | 81.2 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047492.1:89528-94816:- | gene-YFL033C_Sparadoxus | rna-NM_001179933.1_Sparadoxus | cds-NP_116620.1_Sparadoxus | 90.2 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |