Gene name: RIB5
Reference locus (S288C): YBR256C
Gene biotype: protein_coding
Description: Riboflavin synthase; catalyzes the last step of the riboflavin biosynthesis pathway
Top 10 interactors (score): RIB4 (0.999); RIB3 (0.999); RIB1 (0.997); RIB7 (0.996); FMN1 (0.993); RIB2 (0.929); LTP1 (0.902); PHO11 (0.9); PHO3 (0.9); PHO12 (0.9); DIA3 (0.9); PHO5 (0.9); YGL117W (0.84); FAD1 (0.826); JIP5 (0.731); RER2 (0.729); SHM1 (0.723); FMO1 (0.659); ORT1 (0.632); TMT1 (0.608)
Homologues (species, bitscore): AT2G20690 (Arabidopsis thaliana, 171.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:711668-712384:- | gene-YBR256C_AKU4011 | rna-NM_001178604.1_AKU4011 | cds-NP_009815.1_AKU4011 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000066.1:82692-83408:- | gene-YBR256C_BG1 | rna-NM_001178604.1_BG1 | cds-NP_009815.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:712833-713549:- | gene-YBR256C_Bruggeman | rna-NM_001178604.1_Bruggeman | cds-NP_009815.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:716587-717303:- | gene-YBR256C_CAT1 | rna-NM_001178604.1_CAT1 | cds-NP_009815.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:703234-703950:- | gene-YBR256C_CBS1585 | rna-NM_001178604.1_CBS1585 | cds-NP_009815.1_CBS1585 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:709682-710398:- | gene-YBR256C_CBS436 | rna-NM_001178604.1_CBS436 | cds-NP_009815.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:797849-798565:- | gene-YBR256C_CBS6412 | rna-NM_001178604.1_CBS6412 | cds-NP_009815.1_CBS6412 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:709282-709998:- | gene-YBR256C_CBS6413 | rna-NM_001178604.1_CBS6413 | cds-NP_009815.1_CBS6413 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:721294-722010:- | gene-YBR256C_CENPK1137D | rna-NM_001178604.1_CENPK1137D | cds-NP_009815.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:834705-835421:- | gene-YBR256C_EthanolRed | rna-NM_001178604.1_EthanolRed | cds-NP_009815.1_EthanolRed | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:728052-728768:- | gene-YBR256C_FaliES1 | rna-NM_001178604.1_FaliES1 | cds-NP_009815.1_FaliES1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000067.1:75288-76004:+ | gene-YBR256C_JAY291 | rna-NM_001178604.1_JAY291 | cds-NP_009815.1_JAY291 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:714876-715592:- | gene-YBR256C_MUCL30387 | rna-NM_001178604.1_MUCL30387 | cds-NP_009815.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:731959-732675:- | gene-YBR256C_MUCL30388 | rna-NM_001178604.1_MUCL30388 | cds-NP_009815.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:701541-702257:- | gene-YBR256C_MUCL39482 | rna-NM_001178604.1_MUCL39482 | cds-NP_009815.1_MUCL39482 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:711414-712130:- | gene-YBR256C_MUCL42920 | rna-NM_001178604.1_MUCL42920 | cds-NP_009815.1_MUCL42920 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:727183-727899:- | gene-YBR256C_NCIM3186 | rna-NM_001178604.1_NCIM3186 | cds-NP_009815.1_NCIM3186 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:703430-704146:- | gene-YBR256C_NCYC1407 | rna-NM_001178604.1_NCYC1407 | cds-NP_009815.1_NCYC1407 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:726562-727278:- | gene-YBR256C_PE2H3 | rna-NM_001178604.1_PE2H3 | cds-NP_009815.1_PE2H3 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:724238-724954:- | gene-YBR256C_PE2H4 | rna-NM_001178604.1_PE2H4 | cds-NP_009815.1_PE2H4 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:727386-728102:- | gene-YBR256C_S288C | rna-NM_001178604.1_S288C | cds-NP_009815.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000019.1:82513-83229:- | gene-YBR256C_SA1 | rna-NM_001178604.1_SA1 | cds-NP_009815.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:727044-727760:- | gene-YBR256C_ThermosaccDry | rna-NM_001178604.1_ThermosaccDry | cds-NP_009815.1_ThermosaccDry | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:707260-707976:- | gene-YBR256C_VR1 | rna-NM_001178604.1_VR1 | cds-NP_009815.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:699891-700607:- | gene-YBR256C_ZTW1 | rna-NM_001178604.1_ZTW1 | cds-NP_009815.1_ZTW1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:743805-744521:- | gene-YBR256C_Sparadoxus | rna-NM_001178604.1_Sparadoxus | cds-NP_009815.1_Sparadoxus | 88.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |