Gene name: RIB1
Reference locus (S288C): YBL033C
Gene biotype: protein_coding
Description: GTP cyclohydrolase II; catalyzes the first step of the riboflavin biosynthesis pathway
Top 10 interactors (score): RIB7 (0.999); RIB5 (0.997); RIB3 (0.997); RIB4 (0.994); FOL2 (0.978); RIB2 (0.918); FMN1 (0.86); URA3 (0.83); HAM1 (0.83); YNK1 (0.828); CYR1 (0.807); PYK2 (0.802); CDC19 (0.8); YND1 (0.8); FUR1 (0.764); FAD1 (0.748); CRN1 (0.745); MSS1 (0.744); TRP5 (0.657); BSC6 (0.617)
Homologues (species, bitscore): RIBA3 (Arabidopsis thaliana, 139.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:152271-153308:- | gene-YBL033C_AKU4011 | rna-NM_001178273.1_AKU4011 | cds-NP_009520.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:143091-144128:- | gene-YBL033C_BG1 | rna-NM_001178273.1_BG1 | cds-NP_009520.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:152854-153891:- | gene-YBL033C_Bruggeman | rna-NM_001178273.1_Bruggeman | cds-NP_009520.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:155487-156524:- | gene-YBL033C_CAT1 | rna-NM_001178273.1_CAT1 | cds-NP_009520.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:144811-145848:- | gene-YBL033C_CBS1585 | rna-NM_001178273.1_CBS1585 | cds-NP_009520.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:153322-154359:- | gene-YBL033C_CBS436 | rna-NM_001178273.1_CBS436 | cds-NP_009520.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:243567-244604:- | gene-YBL033C_CBS6412 | rna-NM_001178273.1_CBS6412 | cds-NP_009520.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:150382-151419:- | gene-YBL033C_CBS6413 | rna-NM_001178273.1_CBS6413 | cds-NP_009520.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:152404-153441:- | gene-YBL033C_CENPK1137D | rna-NM_001178273.1_CENPK1137D | cds-NP_009520.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:166231-167268:- | gene-YBL033C_EthanolRed | rna-NM_001178273.1_EthanolRed | cds-NP_009520.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:167078-168115:- | gene-YBL033C_FaliES1 | rna-NM_001178273.1_FaliES1 | cds-NP_009520.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000072.1:69715-70752:- | gene-YBL033C_JAY291 | rna-NM_001178273.1_JAY291 | cds-NP_009520.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:152233-153270:- | gene-YBL033C_MUCL30387 | rna-NM_001178273.1_MUCL30387 | cds-NP_009520.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:153504-154541:- | gene-YBL033C_MUCL30388 | rna-NM_001178273.1_MUCL30388 | cds-NP_009520.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:144986-146023:- | gene-YBL033C_MUCL39482 | rna-NM_001178273.1_MUCL39482 | cds-NP_009520.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:151818-152855:- | gene-YBL033C_MUCL42920 | rna-NM_001178273.1_MUCL42920 | cds-NP_009520.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:158453-159490:- | gene-YBL033C_NCIM3186 | rna-NM_001178273.1_NCIM3186 | cds-NP_009520.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:146123-147160:- | gene-YBL033C_NCYC1407 | rna-NM_001178273.1_NCYC1407 | cds-NP_009520.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:152392-153429:- | gene-YBL033C_PE2H3 | rna-NM_001178273.1_PE2H3 | cds-NP_009520.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:150036-151073:- | gene-YBL033C_PE2H4 | rna-NM_001178273.1_PE2H4 | cds-NP_009520.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:158656-159693:- | gene-YBL033C_S288C | rna-NM_001178273.1_S288C | cds-NP_009520.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000051.1:43243-44280:- | gene-YBL033C_SA1 | rna-NM_001178273.1_SA1 | cds-NP_009520.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:167031-168068:- | gene-YBL033C_ThermosaccDry | rna-NM_001178273.1_ThermosaccDry | cds-NP_009520.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:149221-150258:- | gene-YBL033C_VR1 | rna-NM_001178273.1_VR1 | cds-NP_009520.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:143751-144788:- | gene-YBL033C_ZTW1 | rna-NM_001178273.1_ZTW1 | cds-NP_009520.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:178645-179682:- | gene-YBL033C_Sparadoxus | rna-NM_001178273.1_Sparadoxus | cds-NP_009520.1_Sparadoxus | 89.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |