Gene name: RHO5
Reference locus (S288C): YNL180C
Gene biotype: protein_coding
Description: GTP-binding protein RHO5; Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; RAC1 ortholog; regulated by phosphorylation and ubiquitination; likely involved in protein kinase C (Pkc1p)-dependent signal transduction pathway that controls cell integrity
Top 10 interactors (score): BZZ1 (0.967); BAG7 (0.96); ECM25 (0.955); BUD5 (0.944); CDC25 (0.944); SAC7 (0.943); RDI1 (0.927); DCK1 (0.917); PKC1 (0.915); FUS2 (0.9); PAN1 (0.9); END3 (0.9); ROM1 (0.873); LMO1 (0.863); RGD2 (0.861); RGD1 (0.847); LAS17 (0.843); PRR2 (0.816); GPA2 (0.79); NCE102 (0.786)
Homologues (species, bitscore): CDC42 (Homo sapiens, 198.4); Cdc42 (Mus musculus, 198.4); cdc42 (Danio rerio, 199.9); cdc42 (Xenopus tropicalis, 199.9); Cdc42 (Drosophila melanogaster, 196.1); cdc-42 (Caenorhabditis elegans, 200.3); RAC2 (Arabidopsis thaliana, 175.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:293404-294399:- | gene-YNL180C_AKU4011 | rna-NM_001183018.1_AKU4011 | cds-NP_014219.1_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:197380-198375:- | gene-YNL180C_BG1 | rna-NM_001183018.1_BG1 | cds-NP_014219.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:303437-304432:- | gene-YNL180C_Bruggeman | rna-NM_001183018.1_Bruggeman | cds-NP_014219.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:345731-346726:- | gene-YNL180C_CAT1 | rna-NM_001183018.1_CAT1 | cds-NP_014219.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:294047-295042:- | gene-YNL180C_CBS1585 | rna-NM_001183018.1_CBS1585 | cds-NP_014219.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:362356-363351:- | gene-YNL180C_CBS436 | rna-NM_001183018.1_CBS436 | cds-NP_014219.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:289461-290456:- | gene-YNL180C_CBS6412 | rna-NM_001183018.1_CBS6412 | cds-NP_014219.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:290480-291475:- | gene-YNL180C_CBS6413 | rna-NM_001183018.1_CBS6413 | cds-NP_014219.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:293482-294477:- | gene-YNL180C_CENPK1137D | rna-NM_001183018.1_CENPK1137D | cds-NP_014219.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:290379-291374:- | gene-YNL180C_EthanolRed | rna-NM_001183018.1_EthanolRed | cds-NP_014219.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:286292-287287:- | gene-YNL180C_FaliES1 | rna-NM_001183018.1_FaliES1 | cds-NP_014219.1_FaliES1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000260.1:31235-32230:+ | gene-YNL180C_JAY291 | rna-NM_001183018.1_JAY291 | cds-NP_014219.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:299252-300247:- | gene-YNL180C_MUCL30387 | rna-NM_001183018.1_MUCL30387 | cds-NP_014219.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:333570-334565:- | gene-YNL180C_MUCL30388 | rna-NM_001183018.1_MUCL30388 | cds-NP_014219.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:291286-292281:- | gene-YNL180C_MUCL39482 | rna-NM_001183018.1_MUCL39482 | cds-NP_014219.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:293676-294671:- | gene-YNL180C_MUCL42920 | rna-NM_001183018.1_MUCL42920 | cds-NP_014219.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:299623-300618:- | gene-YNL180C_NCIM3186 | rna-NM_001183018.1_NCIM3186 | cds-NP_014219.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:293380-294375:- | gene-YNL180C_NCYC1407 | rna-NM_001183018.1_NCYC1407 | cds-NP_014219.1_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:290324-291319:- | gene-YNL180C_PE2H3 | rna-NM_001183018.1_PE2H3 | cds-NP_014219.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:289712-290707:- | gene-YNL180C_PE2H4 | rna-NM_001183018.1_PE2H4 | cds-NP_014219.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:299654-300649:- | gene-YNL180C_S288C | rna-NM_001183018.1_S288C | cds-NP_014219.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:112957-113952:+ | gene-YNL180C_SA1 | rna-NM_001183018.1_SA1 | cds-NP_014219.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:287149-288144:- | gene-YNL180C_ThermosaccDry | rna-NM_001183018.1_ThermosaccDry | cds-NP_014219.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:305648-306643:- | gene-YNL180C_VR1 | rna-NM_001183018.1_VR1 | cds-NP_014219.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:196977-197972:- | gene-YNL180C_ZTW1 | rna-NM_001183018.1_ZTW1 | cds-NP_014219.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:297704-298699:- | gene-YNL180C_Sparadoxus | rna-NM_001183018.1_Sparadoxus | cds-NP_014219.1_Sparadoxus | 92.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |