Gene name: RGP1
Reference locus (S288C): YDR137W
Gene biotype: protein_coding
Description: Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p); this complex catalyzes nucleotide exchange on Ypt6p; Belongs to the RGP1 family
Top 10 interactors (score): RIC1 (0.997); YPT6 (0.989); MRS6 (0.904); GDI1 (0.903); GCD1 (0.901); GCD6 (0.901); GCD2 (0.9); GCD7 (0.9); GCN3 (0.9); VPS52 (0.863); VPS51 (0.815); TRS130 (0.774); VPS17 (0.773); VPS53 (0.763); VPS54 (0.762); TRS120 (0.743); COG8 (0.721); GYP6 (0.7); VPS35 (0.699); ANY1 (0.686)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:699194-701185:+ | gene-YDR137W_AKU4011 | rna-NM_001180444.1_AKU4011 | cds-NP_010421.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:423654-425645:- | gene-YDR137W_BG1 | rna-NM_001180444.1_BG1 | cds-NP_010421.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:731249-733240:+ | gene-YDR137W_Bruggeman | rna-NM_001180444.1_Bruggeman | cds-NP_010421.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:719221-721212:+ | gene-YDR137W_CAT1 | rna-NM_001180444.1_CAT1 | cds-NP_010421.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:690232-692223:+ | gene-YDR137W_CBS1585 | rna-NM_001180444.1_CBS1585 | cds-NP_010421.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:716135-718126:+ | gene-YDR137W_CBS436 | rna-NM_001180444.1_CBS436 | cds-NP_010421.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:686584-688575:+ | gene-YDR137W_CBS6412 | rna-NM_001180444.1_CBS6412 | cds-NP_010421.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:715560-717551:+ | gene-YDR137W_CBS6413 | rna-NM_001180444.1_CBS6413 | cds-NP_010421.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:720697-722688:+ | gene-YDR137W_CENPK1137D | rna-NM_001180444.1_CENPK1137D | cds-NP_010421.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:700957-702948:+ | gene-YDR137W_EthanolRed | rna-NM_001180444.1_EthanolRed | cds-NP_010421.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:707751-709742:+ | gene-YDR137W_FaliES1 | rna-NM_001180444.1_FaliES1 | cds-NP_010421.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000002.1:59896-61887:+ | gene-YDR137W_JAY291 | rna-NM_001180444.1_JAY291 | cds-NP_010421.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:717173-719164:+ | gene-YDR137W_MUCL30387 | rna-NM_001180444.1_MUCL30387 | cds-NP_010421.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:706192-708183:+ | gene-YDR137W_MUCL30388 | rna-NM_001180444.1_MUCL30388 | cds-NP_010421.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:691575-693566:+ | gene-YDR137W_MUCL39482 | rna-NM_001180444.1_MUCL39482 | cds-NP_010421.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:629531-631522:+ | gene-YDR137W_MUCL42920 | rna-NM_001180444.1_MUCL42920 | cds-NP_010421.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:728182-730173:+ | gene-YDR137W_NCIM3186 | rna-NM_001180444.1_NCIM3186 | cds-NP_010421.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:690976-692967:+ | gene-YDR137W_NCYC1407 | rna-NM_001180444.1_NCYC1407 | cds-NP_010421.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:710314-712305:+ | gene-YDR137W_PE2H3 | rna-NM_001180444.1_PE2H3 | cds-NP_010421.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:709619-711610:+ | gene-YDR137W_PE2H4 | rna-NM_001180444.1_PE2H4 | cds-NP_010421.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:728259-730250:+ | gene-YDR137W_S288C | rna-NM_001180444.1_S288C | cds-NP_010421.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:76930-78921:+ | gene-YDR137W_SA1 | rna-NM_001180444.1_SA1 | cds-NP_010421.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:707273-709264:+ | gene-YDR137W_ThermosaccDry | rna-NM_001180444.1_ThermosaccDry | cds-NP_010421.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:720628-722619:+ | gene-YDR137W_VR1 | rna-NM_001180444.1_VR1 | cds-NP_010421.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:704854-706845:+ | gene-YDR137W_ZTW1 | rna-NM_001180444.1_ZTW1 | cds-NP_010421.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:709416-711407:+ | gene-YDR137W_Sparadoxus | rna-NM_001180444.1_Sparadoxus | cds-NP_010421.1_Sparadoxus | 88.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |