RGL1 (YPL066W)


Gene profile

Gene name: RGL1
Reference locus (S288C): YPL066W
Gene biotype: protein_coding

Description: Uncharacterized protein YPL066W; Regulator of Rho1p signaling, cofactor of Tus1p; required for the localization of Tus1p during all phases of cytokinesis; green fluorescent protein (GFP)-fusion protein localizes to the bud neck and cytoplasm; null mutant is viable and exhibits growth defect on a non-fermentable (respiratory) carbon source

Top 10 interactors (score): ACK1 (0.912); TUS1 (0.806); IPP1 (0.776); YPL067C (0.745); BNI4 (0.71); SDD1 (0.698); FIR1 (0.68); MLF3 (0.669); RGD1 (0.652); PCL10 (0.499); NBP2 (0.482); UTR2 (0.453); CYK3 (0.45); CHS3 (0.446); SKT5 (0.441); BNI1 (0.44); SPA2 (0.415)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:403954-405393:+ gene-YPL066W_AKU4011 rna-NM_001183880.1_AKU4011 cds-NP_015259.1_AKU4011 99.7 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:609632-611071:+ gene-YPL066W_BG1 rna-NM_001183880.1_BG1 cds-NP_015259.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:480282-481721:+ gene-YPL066W_Bruggeman rna-NM_001183880.1_Bruggeman cds-NP_015259.1_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:520641-522080:+ gene-YPL066W_CAT1 rna-NM_001183880.1_CAT1 cds-NP_015259.1_CAT1 99.3 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:408027-409466:+ gene-YPL066W_CBS1585 rna-NM_001183880.1_CBS1585 cds-NP_015259.1_CBS1585 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:422585-424024:+ gene-YPL066W_CBS436 rna-NM_001183880.1_CBS436 cds-NP_015259.1_CBS436 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:412216-413655:+ gene-YPL066W_CBS6412 rna-NM_001183880.1_CBS6412 cds-NP_015259.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:404579-406018:+ gene-YPL066W_CBS6413 rna-NM_001183880.1_CBS6413 cds-NP_015259.1_CBS6413 99.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:426198-427637:+ gene-YPL066W_CENPK1137D rna-NM_001183880.1_CENPK1137D cds-NP_015259.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:402319-403758:+ gene-YPL066W_EthanolRed rna-NM_001183880.1_EthanolRed cds-NP_015259.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:410149-411588:+ gene-YPL066W_FaliES1 rna-NM_001183880.1_FaliES1 cds-NP_015259.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000283.1:18753-20192:+ gene-YPL066W_JAY291 rna-NM_001183880.1_JAY291 cds-NP_015259.1_JAY291 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:421112-422551:+ gene-YPL066W_MUCL30387 rna-NM_001183880.1_MUCL30387 cds-NP_015259.1_MUCL30387 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:420199-421638:+ gene-YPL066W_MUCL30388 rna-NM_001183880.1_MUCL30388 cds-NP_015259.1_MUCL30388 99.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:401356-402795:+ gene-YPL066W_MUCL39482 rna-NM_001183880.1_MUCL39482 cds-NP_015259.1_MUCL39482 99.7 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:459220-460659:+ gene-YPL066W_MUCL42920 rna-NM_001183880.1_MUCL42920 cds-NP_015259.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:426216-427655:+ gene-YPL066W_NCIM3186 rna-NM_001183880.1_NCIM3186 cds-NP_015259.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:408640-410079:+ gene-YPL066W_NCYC1407 rna-NM_001183880.1_NCYC1407 cds-NP_015259.1_NCYC1407 99.7 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:415245-416684:+ gene-YPL066W_PE2H3 rna-NM_001183880.1_PE2H3 cds-NP_015259.1_PE2H3 99.3 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:414866-416305:+ gene-YPL066W_PE2H4 rna-NM_001183880.1_PE2H4 cds-NP_015259.1_PE2H4 99.4 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:426233-427672:+ gene-YPL066W_S288C rna-NM_001183880.1_S288C cds-NP_015259.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000057.1:48341-49780:+ gene-YPL066W_SA1 rna-NM_001183880.1_SA1 cds-NP_015259.1_SA1 99.3 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:409949-411388:+ gene-YPL066W_ThermosaccDry rna-NM_001183880.1_ThermosaccDry cds-NP_015259.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:424954-426393:+ gene-YPL066W_VR1 rna-NM_001183880.1_VR1 cds-NP_015259.1_VR1 99.2 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:409260-410699:+ gene-YPL066W_ZTW1 rna-NM_001183880.1_ZTW1 cds-NP_015259.1_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:410989-412428:+ gene-YPL066W_Sparadoxus rna-NM_001183880.1_Sparadoxus cds-NP_015259.1_Sparadoxus 87.9 99.9 Verified 1 1 1 False True False False False

Additional files