Gene name: RGD3
Reference locus (S288C): YHR182W
Gene biotype: protein_coding
Description: Uncharacterized protein YHR182W; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and cytoplasm; relocalizes from bud neck to cytoplasm upon DNA replication stress
Top 10 interactors (score): YHR180W (0.945); OYE2 (0.76); YOR385W (0.747); STB5 (0.744); SIP5 (0.568); FRE5 (0.528); VHS1 (0.499); VPS4 (0.428)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:455307-457664:+ | gene-YHR182W_AKU4011 | rna-NM_001179313.1_AKU4011 | cds-NP_012052.1_AKU4011 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:60086-62443:- | gene-YHR182W_BG1 | rna-NM_001179313.1_BG1 | cds-NP_012052.1_BG1 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:462556-464913:+ | gene-YHR182W_Bruggeman | rna-NM_001179313.1_Bruggeman | cds-NP_012052.1_Bruggeman | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:458820-461177:+ | gene-YHR182W_CAT1 | rna-NM_001179313.1_CAT1 | cds-NP_012052.1_CAT1 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:454759-457116:+ | gene-YHR182W_CBS1585 | rna-NM_001179313.1_CBS1585 | cds-NP_012052.1_CBS1585 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:452208-454565:+ | gene-YHR182W_CBS436 | rna-NM_001179313.1_CBS436 | cds-NP_012052.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:454858-457215:+ | gene-YHR182W_CBS6412 | rna-NM_001179313.1_CBS6412 | cds-NP_012052.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:456149-458506:+ | gene-YHR182W_CBS6413 | rna-NM_001179313.1_CBS6413 | cds-NP_012052.1_CBS6413 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:461407-463764:+ | gene-YHR182W_CENPK1137D | rna-NM_001179313.1_CENPK1137D | cds-NP_012052.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:513852-516209:+ | gene-YHR182W_EthanolRed | rna-NM_001179313.1_EthanolRed | cds-NP_012052.1_EthanolRed | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:456296-458653:+ | gene-YHR182W_FaliES1 | rna-NM_001179313.1_FaliES1 | cds-NP_012052.1_FaliES1 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000147.1:1446-3803:+ | gene-YHR182W_JAY291 | rna-NM_001179313.1_JAY291 | cds-NP_012052.1_JAY291 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:463882-466239:+ | gene-YHR182W_MUCL30387 | rna-NM_001179313.1_MUCL30387 | cds-NP_012052.1_MUCL30387 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:463305-465662:+ | gene-YHR182W_MUCL30388 | rna-NM_001179313.1_MUCL30388 | cds-NP_012052.1_MUCL30388 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:454670-457027:+ | gene-YHR182W_MUCL39482 | rna-NM_001179313.1_MUCL39482 | cds-NP_012052.1_MUCL39482 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:462612-464969:+ | gene-YHR182W_MUCL42920 | rna-NM_001179313.1_MUCL42920 | cds-NP_012052.1_MUCL42920 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:468101-470458:+ | gene-YHR182W_NCIM3186 | rna-NM_001179313.1_NCIM3186 | cds-NP_012052.1_NCIM3186 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:457131-459488:+ | gene-YHR182W_NCYC1407 | rna-NM_001179313.1_NCYC1407 | cds-NP_012052.1_NCYC1407 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:456285-458641:+ | gene-YHR182W_PE2H3 | rna-NM_001179313.1_PE2H3 | cds-NP_012052.1_PE2H3 | 99.5 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:463712-466068:+ | gene-YHR182W_PE2H4 | rna-NM_001179313.1_PE2H4 | cds-NP_012052.1_PE2H4 | 99.5 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:468219-470576:+ | gene-YHR182W_S288C | rna-NM_001179313.1_S288C | cds-NP_012052.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000079.1:16375-18732:+ | gene-YHR182W_SA1 | rna-NM_001179313.1_SA1 | cds-NP_012052.1_SA1 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:457379-459736:+ | gene-YHR182W_ThermosaccDry | rna-NM_001179313.1_ThermosaccDry | cds-NP_012052.1_ThermosaccDry | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:466585-468942:+ | gene-YHR182W_VR1 | rna-NM_001179313.1_VR1 | cds-NP_012052.1_VR1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:447617-449974:+ | gene-YHR182W_ZTW1 | rna-NM_001179313.1_ZTW1 | cds-NP_012052.1_ZTW1 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:454296-456659:+ | gene-YHR182W_Sparadoxus | rna-NM_001179313.1_Sparadoxus | cds-NP_012052.1_Sparadoxus | 86.7 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |