Gene name: RGD2
Reference locus (S288C): YFL047W
Gene biotype: protein_coding
Description: Rho-GTPase-activating protein RGD2; GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p; relocalizes from bud neck to cytoplasm upon DNA replication stress
Top 10 interactors (score): RGD1 (0.947); RHO5 (0.861); HOF1 (0.836); BZZ1 (0.824); YJL055W (0.75); BAG7 (0.748); YLR042C (0.714); NAB6 (0.705); SFG1 (0.699); RPI1 (0.691); CYK3 (0.674); PXL1 (0.656); CDC42 (0.648); SAC7 (0.639); APL2 (0.624); ARC15 (0.623); LRG1 (0.609); ARP2 (0.604); YAP1801 (0.603); APL3 (0.603)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005300.1:36759-38903:+ | gene-YFL047W_AKU4011 | rna-NM_001179920.1_AKU4011 | cds-NP_428268.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000182.1:30890-33034:- | gene-YFL047W_BG1 | rna-NM_001179920.1_BG1 | cds-NP_428268.1_BG1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005508.1:35137-37281:+ | gene-YFL047W_Bruggeman | rna-NM_001179920.1_Bruggeman | cds-NP_428268.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005524.1:40525-42669:+ | gene-YFL047W_CAT1 | rna-NM_001179920.1_CAT1 | cds-NP_428268.1_CAT1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005364.1:37436-39580:+ | gene-YFL047W_CBS1585 | rna-NM_001179920.1_CBS1585 | cds-NP_428268.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005348.1:11070-13214:+ | gene-YFL047W_CBS436 | rna-NM_001179920.1_CBS436 | cds-NP_428268.1_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005332.1:37676-39820:+ | gene-YFL047W_CBS6412 | rna-NM_001179920.1_CBS6412 | cds-NP_428268.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005316.1:39837-41981:+ | gene-YFL047W_CBS6413 | rna-NM_001179920.1_CBS6413 | cds-NP_428268.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001527.1:36747-38891:+ | gene-YFL047W_CENPK1137D | rna-NM_001179920.1_CENPK1137D | cds-NP_428268.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005476.1:36103-38247:+ | gene-YFL047W_EthanolRed | rna-NM_001179920.1_EthanolRed | cds-NP_428268.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005540.1:37311-39455:+ | gene-YFL047W_FaliES1 | rna-NM_001179920.1_FaliES1 | cds-NP_428268.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000448.1:45767-47911:+ | gene-YFL047W_JAY291 | rna-NM_001179920.1_JAY291 | cds-NP_428268.1_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005412.1:37726-39870:+ | gene-YFL047W_MUCL30387 | rna-NM_001179920.1_MUCL30387 | cds-NP_428268.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005444.1:34750-36894:+ | gene-YFL047W_MUCL30388 | rna-NM_001179920.1_MUCL30388 | cds-NP_428268.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005284.1:35952-38096:+ | gene-YFL047W_MUCL39482 | rna-NM_001179920.1_MUCL39482 | cds-NP_428268.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005428.1:33655-35799:+ | gene-YFL047W_MUCL42920 | rna-NM_001179920.1_MUCL42920 | cds-NP_428268.1_MUCL42920 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011815.1:40420-42564:+ | gene-YFL047W_NCIM3186 | rna-NM_001179920.1_NCIM3186 | cds-NP_428268.1_NCIM3186 | 94.1 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005268.1:37029-39173:+ | gene-YFL047W_NCYC1407 | rna-NM_001179920.1_NCYC1407 | cds-NP_428268.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994145.1:56921-59065:+ | gene-YFL047W_PE2H3 | rna-NM_001179920.1_PE2H3 | cds-NP_428268.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999877.1:56472-58616:+ | gene-YFL047W_PE2H4 | rna-NM_001179920.1_PE2H4 | cds-NP_428268.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001138.5:40421-42565:+ | gene-YFL047W_S288C | rna-NM_001179920.1_S288C | cds-NP_428268.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:293067-295211:- | gene-YFL047W_SA1 | rna-NM_001179920.1_SA1 | cds-NP_428268.1_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005492.1:36499-38643:+ | gene-YFL047W_ThermosaccDry | rna-NM_001179920.1_ThermosaccDry | cds-NP_428268.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005460.1:44793-46937:+ | gene-YFL047W_VR1 | rna-NM_001179920.1_VR1 | cds-NP_428268.1_VR1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000012.1:21795-23939:+ | gene-YFL047W_ZTW1 | rna-NM_001179920.1_ZTW1 | cds-NP_428268.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047492.1:60803-62948:+ | gene-YFL047W_Sparadoxus | rna-NM_001179920.1_Sparadoxus | cds-NP_428268.1_Sparadoxus | 90.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |