Gene name: RGC1
Reference locus (S288C): YPR115W
Gene biotype: protein_coding
Description: Putative regulator of the Fps1p glycerol channel; multiply phosphorylated by Hog1p under osmotic stress; contains a pleckstrin homology domain; forms homodimers and heterodimerizes with paralog Ask10p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; Belongs to the RGC1 family
Top 10 interactors (score): FPS1 (0.908); HOG1 (0.856); ASK10 (0.8); ZAP1 (0.592); HOT1 (0.573); GIP3 (0.559); SHO1 (0.497); SSK22 (0.489); MSC3 (0.487); PIL1 (0.455); EIS1 (0.451); FKS1 (0.45); SNZ3 (0.45); STB2 (0.45); AEP3 (0.44); UBP15 (0.422); YCF1 (0.414)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:726701-729952:+ | gene-YPR115W_AKU4011 | rna-NM_001184212.1_AKU4011 | cds-NP_015440.1_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:167860-171111:- | gene-YPR115W_BG1 | rna-NM_001184212.1_BG1 | cds-NP_015440.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:805809-809473:+ | gene-YPR115W_Bruggeman | rna-NM_001184212.1_Bruggeman | cds-NP_015440.1_Bruggeman | 88.0 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:849012-852263:+ | gene-YPR115W_CAT1 | rna-NM_001184212.1_CAT1 | cds-NP_015440.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:730958-734209:+ | gene-YPR115W_CBS1585 | rna-NM_001184212.1_CBS1585 | cds-NP_015440.1_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:745262-748513:+ | gene-YPR115W_CBS436 | rna-NM_001184212.1_CBS436 | cds-NP_015440.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:733681-736932:+ | gene-YPR115W_CBS6412 | rna-NM_001184212.1_CBS6412 | cds-NP_015440.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:728404-731655:+ | gene-YPR115W_CBS6413 | rna-NM_001184212.1_CBS6413 | cds-NP_015440.1_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:754863-758114:+ | gene-YPR115W_CENPK1137D | rna-NM_001184212.1_CENPK1137D | cds-NP_015440.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:1053313-1056564:+ | gene-YPR115W_EthanolRed | rna-NM_001184212.1_EthanolRed | cds-NP_015440.1_EthanolRed | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:732860-736111:+ | gene-YPR115W_FaliES1 | rna-NM_001184212.1_FaliES1 | cds-NP_015440.1_FaliES1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000436.1:23635-26886:+ | gene-YPR115W_JAY291 | rna-NM_001184212.1_JAY291 | cds-NP_015440.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:745967-749218:+ | gene-YPR115W_MUCL30387 | rna-NM_001184212.1_MUCL30387 | cds-NP_015440.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:744662-748369:+ | gene-YPR115W_MUCL30388 | rna-NM_001184212.1_MUCL30388 | cds-NP_015440.1_MUCL30388 | 87.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:723465-726716:+ | gene-YPR115W_MUCL39482 | rna-NM_001184212.1_MUCL39482 | cds-NP_015440.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:787005-790256:+ | gene-YPR115W_MUCL42920 | rna-NM_001184212.1_MUCL42920 | cds-NP_015440.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:754860-758111:+ | gene-YPR115W_NCIM3186 | rna-NM_001184212.1_NCIM3186 | cds-NP_015440.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:732058-735309:+ | gene-YPR115W_NCYC1407 | rna-NM_001184212.1_NCYC1407 | cds-NP_015440.1_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:738333-741584:+ | gene-YPR115W_PE2H3 | rna-NM_001184212.1_PE2H3 | cds-NP_015440.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:737981-741232:+ | gene-YPR115W_PE2H4 | rna-NM_001184212.1_PE2H4 | cds-NP_015440.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:754877-758128:+ | gene-YPR115W_S288C | rna-NM_001184212.1_S288C | cds-NP_015440.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000028.1:53015-56266:+ | gene-YPR115W_SA1 | rna-NM_001184212.1_SA1 | cds-NP_015440.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:732305-735556:+ | gene-YPR115W_ThermosaccDry | rna-NM_001184212.1_ThermosaccDry | cds-NP_015440.1_ThermosaccDry | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:748965-752216:+ | gene-YPR115W_VR1 | rna-NM_001184212.1_VR1 | cds-NP_015440.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:731356-734607:+ | gene-YPR115W_ZTW1 | rna-NM_001184212.1_ZTW1 | cds-NP_015440.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:732300-735565:+ | gene-YPR115W_Sparadoxus | rna-NM_001184212.1_Sparadoxus | cds-NP_015440.1_Sparadoxus | 85.1 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |