Gene name: RGA2
Reference locus (S288C): YDR379W
Gene biotype: protein_coding
Description: GTPase-activating protein for polarity-establishment protein Cdc42p; implicated in control of septin organization, pheromone response, and haploid invasive growth; regulated by Pho85p and Cdc28p; RGA2 has a paralog, RGA1, that arose from the whole genome duplication
Top 10 interactors (score): CDC24 (0.998); CDC42 (0.998); YAK1 (0.987); RGA1 (0.927); BEM1 (0.921); RSR1 (0.871); CDC28 (0.858); CLA4 (0.854); RHO1 (0.848); BNI1 (0.823); RHO4 (0.817); PXL1 (0.815); BEM2 (0.803); BUD14 (0.798); ACT1 (0.792); EXO84 (0.766); PSY2 (0.761); KNS1 (0.756); STE20 (0.745); SAC6 (0.744)
Homologues (species, bitscore): ARHGAP15 (Homo sapiens, 101.7); Arhgap15 (Mus musculus, 101.3); arhgap12b (Danio rerio, 109.8); arhgap27 (Xenopus tropicalis, 110.5); CdGAPr (Drosophila melanogaster, 90.9); tag-325 (Caenorhabditis elegans, 97.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:565560-568589:+ | gene-YDR379W_AKU4011 | rna-NM_001180687.1_AKU4011 | cds-NP_010667.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:48859-51888:+ | gene-YDR379W_BG1 | rna-NM_001180687.1_BG1 | cds-NP_010667.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1200943-1203972:+ | gene-YDR379W_Bruggeman | rna-NM_001180687.1_Bruggeman | cds-NP_010667.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1179551-1182580:+ | gene-YDR379W_CAT1 | rna-NM_001180687.1_CAT1 | cds-NP_010667.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1165052-1168081:+ | gene-YDR379W_CBS1585 | rna-NM_001180687.1_CBS1585 | cds-NP_010667.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1183604-1186633:+ | gene-YDR379W_CBS436 | rna-NM_001180687.1_CBS436 | cds-NP_010667.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1161289-1164318:+ | gene-YDR379W_CBS6412 | rna-NM_001180687.1_CBS6412 | cds-NP_010667.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1183179-1186208:+ | gene-YDR379W_CBS6413 | rna-NM_001180687.1_CBS6413 | cds-NP_010667.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1228819-1231848:+ | gene-YDR379W_CENPK1137D | rna-NM_001180687.1_CENPK1137D | cds-NP_010667.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1174707-1177736:+ | gene-YDR379W_EthanolRed | rna-NM_001180687.1_EthanolRed | cds-NP_010667.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1177994-1181023:+ | gene-YDR379W_FaliES1 | rna-NM_001180687.1_FaliES1 | cds-NP_010667.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000057.1:10057-13086:- | gene-YDR379W_JAY291 | rna-NM_001180687.1_JAY291 | cds-NP_010667.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1184262-1187291:+ | gene-YDR379W_MUCL30387 | rna-NM_001180687.1_MUCL30387 | cds-NP_010667.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1166870-1169899:+ | gene-YDR379W_MUCL30388 | rna-NM_001180687.1_MUCL30388 | cds-NP_010667.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1156603-1159632:+ | gene-YDR379W_MUCL39482 | rna-NM_001180687.1_MUCL39482 | cds-NP_010667.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1098994-1102023:+ | gene-YDR379W_MUCL42920 | rna-NM_001180687.1_MUCL42920 | cds-NP_010667.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1230090-1233119:+ | gene-YDR379W_NCIM3186 | rna-NM_001180687.1_NCIM3186 | cds-NP_010667.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1170574-1173603:+ | gene-YDR379W_NCYC1407 | rna-NM_001180687.1_NCYC1407 | cds-NP_010667.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1180658-1183687:+ | gene-YDR379W_PE2H3 | rna-NM_001180687.1_PE2H3 | cds-NP_010667.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1186239-1189268:+ | gene-YDR379W_PE2H4 | rna-NM_001180687.1_PE2H4 | cds-NP_010667.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1230167-1233196:+ | gene-YDR379W_S288C | rna-NM_001180687.1_S288C | cds-NP_010667.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000072.1:48940-51969:+ | gene-YDR379W_SA1 | rna-NM_001180687.1_SA1 | cds-NP_010667.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1182275-1185304:+ | gene-YDR379W_ThermosaccDry | rna-NM_001180687.1_ThermosaccDry | cds-NP_010667.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:609618-612647:+ | gene-YDR379W_VR1 | rna-NM_001180687.1_VR1 | cds-NP_010667.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:225103-228133:+ | gene-YDR379W_ZTW1 | rna-NM_001180687.1_ZTW1 | cds-NP_010667.1_ZTW1 | 99.9 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1176847-1179876:+ | gene-YDR379W_Sparadoxus | rna-NM_001180687.1_Sparadoxus | cds-NP_010667.1_Sparadoxus | 88.2 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |