Gene name: RFS1
Reference locus (S288C): YBR052C
Gene biotype: protein_coding
Description: Protein of unknown function; member of a flavodoxin-like fold protein family that includes Pst2p and Ycp4p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; RFS1 has a paralog, PST2, that arose from the whole genome duplication
Top 10 interactors (score): PST2 (0.968); YCP4 (0.949); YBR053C (0.895); LOT6 (0.816); YGL193C (0.748); YNL010W (0.747); FUN14 (0.735); DUS4 (0.692); SHU2 (0.69); PNC1 (0.676); RAD51 (0.663); CTL1 (0.658); SMM1 (0.651); YML131W (0.645); SPI1 (0.64); RAD57 (0.619); SRS2 (0.615); PSY3 (0.612); DUS1 (0.61); DUS3 (0.61)
Homologues (species, bitscore): AT4G27270 (Arabidopsis thaliana, 107.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:321150-321782:- | gene-YBR052C_AKU4011 | rna-NM_001178400.1_AKU4011 | cds-NP_009608.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:311320-311952:- | gene-YBR052C_BG1 | rna-NM_001178400.1_BG1 | cds-NP_009608.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:321890-322522:- | gene-YBR052C_Bruggeman | rna-NM_001178400.1_Bruggeman | cds-NP_009608.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:325575-326207:- | gene-YBR052C_CAT1 | rna-NM_001178400.1_CAT1 | cds-NP_009608.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:313447-314079:- | gene-YBR052C_CBS1585 | rna-NM_001178400.1_CBS1585 | cds-NP_009608.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:321461-322093:- | gene-YBR052C_CBS436 | rna-NM_001178400.1_CBS436 | cds-NP_009608.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:411663-412295:- | gene-YBR052C_CBS6412 | rna-NM_001178400.1_CBS6412 | cds-NP_009608.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:318562-319194:- | gene-YBR052C_CBS6413 | rna-NM_001178400.1_CBS6413 | cds-NP_009608.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:332480-333112:- | gene-YBR052C_CENPK1137D | rna-NM_001178400.1_CENPK1137D | cds-NP_009608.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:447925-448557:- | gene-YBR052C_EthanolRed | rna-NM_001178400.1_EthanolRed | cds-NP_009608.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:337204-337836:- | gene-YBR052C_FaliES1 | rna-NM_001178400.1_FaliES1 | cds-NP_009608.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000209.1:5064-5696:- | gene-YBR052C_JAY291 | rna-NM_001178400.1_JAY291 | cds-NP_009608.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:323514-324146:- | gene-YBR052C_MUCL30387 | rna-NM_001178400.1_MUCL30387 | cds-NP_009608.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:323298-323930:- | gene-YBR052C_MUCL30388 | rna-NM_001178400.1_MUCL30388 | cds-NP_009608.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:313435-314067:- | gene-YBR052C_MUCL39482 | rna-NM_001178400.1_MUCL39482 | cds-NP_009608.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:320639-321271:- | gene-YBR052C_MUCL42920 | rna-NM_001178400.1_MUCL42920 | cds-NP_009608.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:338517-339149:- | gene-YBR052C_NCIM3186 | rna-NM_001178400.1_NCIM3186 | cds-NP_009608.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:314345-314977:- | gene-YBR052C_NCYC1407 | rna-NM_001178400.1_NCYC1407 | cds-NP_009608.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:326526-327158:- | gene-YBR052C_PE2H3 | rna-NM_001178400.1_PE2H3 | cds-NP_009608.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:324202-324834:- | gene-YBR052C_PE2H4 | rna-NM_001178400.1_PE2H4 | cds-NP_009608.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:338720-339352:- | gene-YBR052C_S288C | rna-NM_001178400.1_S288C | cds-NP_009608.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:138185-138817:+ | gene-YBR052C_SA1 | rna-NM_001178400.1_SA1 | cds-NP_009608.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:336215-336847:- | gene-YBR052C_ThermosaccDry | rna-NM_001178400.1_ThermosaccDry | cds-NP_009608.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:318128-318760:- | gene-YBR052C_VR1 | rna-NM_001178400.1_VR1 | cds-NP_009608.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:311943-312575:- | gene-YBR052C_ZTW1 | rna-NM_001178400.1_ZTW1 | cds-NP_009608.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:348518-349150:- | gene-YBR052C_Sparadoxus | rna-NM_001178400.1_Sparadoxus | cds-NP_009608.1_Sparadoxus | 88.5 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |