Gene name: REI1
Reference locus (S288C): YBR267W
Gene biotype: protein_coding
Description: Cytoplasmic pre-60S factor; required for the correct recycling of shuttling factors Alb1, Arx1 and Tif6 at the end of the ribosomal large subunit biogenesis; involved in bud growth in the mitotic signaling network
Top 10 interactors (score): NMD3 (0.999); JJJ1 (0.999); TIF6 (0.999); LSG1 (0.999); ARX1 (0.999); RLP24 (0.999); YVH1 (0.998); NOG1 (0.998); NSA2 (0.997); ALB1 (0.996); NOG2 (0.996); MRT4 (0.996); RRS1 (0.995); RPL25 (0.995); RPL17A (0.994); RPL3 (0.994); SSF1 (0.993); MAK16 (0.993); DBP3 (0.993); RPF2 (0.992)
Homologues (species, bitscore): ZNF622 (Homo sapiens, 168.3); Zfp622 (Mus musculus, 164.5); znf622 (Danio rerio, 191.4); znf622 (Xenopus tropicalis, 166.0); CG6769 (Drosophila melanogaster, 174.9); C16A3.4 (Caenorhabditis elegans, 161.0); FZF (Arabidopsis thaliana, 129.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:724124-725305:+ | gene-YBR267W_AKU4011 | rna-NM_001178615.4_AKU4011 | cds-NP_009825.4_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000066.1:95148-96329:+ | gene-YBR267W_BG1 | rna-NM_001178615.4_BG1 | cds-NP_009825.4_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:725288-726469:+ | gene-YBR267W_Bruggeman | rna-NM_001178615.4_Bruggeman | cds-NP_009825.4_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:729014-730195:+ | gene-YBR267W_CAT1 | rna-NM_001178615.4_CAT1 | cds-NP_009825.4_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:715690-716871:+ | gene-YBR267W_CBS1585 | rna-NM_001178615.4_CBS1585 | cds-NP_009825.4_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:722135-723316:+ | gene-YBR267W_CBS436 | rna-NM_001178615.4_CBS436 | cds-NP_009825.4_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:810305-811486:+ | gene-YBR267W_CBS6412 | rna-NM_001178615.4_CBS6412 | cds-NP_009825.4_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:721738-722919:+ | gene-YBR267W_CBS6413 | rna-NM_001178615.4_CBS6413 | cds-NP_009825.4_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:733748-734929:+ | gene-YBR267W_CENPK1137D | rna-NM_001178615.4_CENPK1137D | cds-NP_009825.4_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:847159-848340:+ | gene-YBR267W_EthanolRed | rna-NM_001178615.4_EthanolRed | cds-NP_009825.4_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:740506-741687:+ | gene-YBR267W_FaliES1 | rna-NM_001178615.4_FaliES1 | cds-NP_009825.4_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000067.1:62369-63550:- | gene-YBR267W_JAY291 | rna-NM_001178615.4_JAY291 | cds-NP_009825.4_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:727331-728512:+ | gene-YBR267W_MUCL30387 | rna-NM_001178615.4_MUCL30387 | cds-NP_009825.4_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:744412-745593:+ | gene-YBR267W_MUCL30388 | rna-NM_001178615.4_MUCL30388 | cds-NP_009825.4_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:713997-715178:+ | gene-YBR267W_MUCL39482 | rna-NM_001178615.4_MUCL39482 | cds-NP_009825.4_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:723868-725049:+ | gene-YBR267W_MUCL42920 | rna-NM_001178615.4_MUCL42920 | cds-NP_009825.4_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:739638-740819:+ | gene-YBR267W_NCIM3186 | rna-NM_001178615.4_NCIM3186 | cds-NP_009825.4_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:715886-717067:+ | gene-YBR267W_NCYC1407 | rna-NM_001178615.4_NCYC1407 | cds-NP_009825.4_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:739016-740197:+ | gene-YBR267W_PE2H3 | rna-NM_001178615.4_PE2H3 | cds-NP_009825.4_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:736692-737873:+ | gene-YBR267W_PE2H4 | rna-NM_001178615.4_PE2H4 | cds-NP_009825.4_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:739841-741022:+ | gene-YBR267W_S288C | rna-NM_001178615.4_S288C | cds-NP_009825.4_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000019.1:94969-96150:+ | gene-YBR267W_SA1 | rna-NM_001178615.4_SA1 | cds-NP_009825.4_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:739498-740679:+ | gene-YBR267W_ThermosaccDry | rna-NM_001178615.4_ThermosaccDry | cds-NP_009825.4_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:719714-720895:+ | gene-YBR267W_VR1 | rna-NM_001178615.4_VR1 | cds-NP_009825.4_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:712343-713524:+ | gene-YBR267W_ZTW1 | rna-NM_001178615.4_ZTW1 | cds-NP_009825.4_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:756252-757433:+ | gene-YBR267W_Sparadoxus | rna-NM_001178615.4_Sparadoxus | cds-NP_009825.4_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |